Flavobacterium ammoniigenes: GENT5_07780
Help
Entry
GENT5_07780 CDS
T08752
Symbol
dnaE
Name
(GenBank) DNA-directed DNA polymerase
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
fan
Flavobacterium ammoniigenes
Pathway
fan03030
DNA replication
fan03430
Mismatch repair
fan03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
fan00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
GENT5_07780 (dnaE)
03430 Mismatch repair
GENT5_07780 (dnaE)
03440 Homologous recombination
GENT5_07780 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
fan03032
]
GENT5_07780 (dnaE)
03400 DNA repair and recombination proteins [BR:
fan03400
]
GENT5_07780 (dnaE)
Enzymes [BR:
fan01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
GENT5_07780 (dnaE)
DNA replication proteins [BR:
fan03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
GENT5_07780 (dnaE)
DNA repair and recombination proteins [BR:
fan03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
GENT5_07780 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
RNase_T
Intimin_C
Motif
Other DBs
NCBI-ProteinID:
BDB54473
LinkDB
All DBs
Position
880544..885085
Genome browser
AA seq
1513 aa
AA seq
DB search
MYLIFDTETTGLPKRWDAPITDTNNWPRCIQIAWQLHDDMGKLIEHQDYLVKPEGFNIPY
DAERIHGISTELAEAEGISLAEVLEKFNIALAKAQFIVGQNLGFDVNIMGCEFHRLGVES
PMASMPVLDTCTEVTASLLQLPGGRGGRFKLPTLTELHSYLFNQPFAEAHNATADVEATT
RCFLELIRRDVFTKEELDVPASYFEDFKNRNPRTIEFIGLKHINLKEASDRIRQQFGEKQ
TETVSKATLSENKKALVDTDFVHLHNHTQFSVLQSTISIAALVKAAAQQKMPAVAMTDHA
NLMGAFHFVRDILAHNKSAAAKNKTAIENGEEPTEVPMKPIVGCEFFVCDNHKDKSRKDN
GYQIVLLAKTKKGYHNLAKMSSIAYTEGFYYVPRIDKKVIQEYKEDIIVLSGNLYGEIPN
KVLNLGENQAEEALLWWKNEFQNDFYIELMRHNQEDENRVNSALVTLARKHEVKLVATNN
TFYIDKENANAHDILLCVRDGEKQTTPIGRGRGYRYGLPNQEYYFKSGDEMKQLFNDLPE
AISNIAEIVDKIEIYDLARDVLLPKFEIPAEFLVPEDEIDGGKRGENKYLRYLTFEGAKK
RYPEITPEIQERLDFELMTIENSGYPGYFLIVQDFIAEARNMGVSVGPGRGSAAGSVVAY
CLKITNIDPLKYNLLFERFLNPDRVSLPDIDIDFDDEGRSSVMDYVIRKYGSKQVAQIIT
YGKMATKSAIRDTARVLDLPLFEADKIAKLIPGMMPSKWNLARFLNEDDALIKKTVRPEE
YDKIKELIALAGGNDLGGDTIQQAKVLEGNLRNTGIHACGVIITPDDITNFVPVATAKDS
DLYVTQFDNSVVESAGLLKMDFLGLKTLTLIKDTVKLVKYRSGIDLNPDEFPIDDQKTYE
LFQRGETVGIFQYESPGMQKYMKELKPTVFPDLIAMNALYRPGPIAYIPSFIKRKNGEEP
IVYDLDDCEELLKDTYGITVYQEQVMLLSQKLADFSKGDADVLRKAMGKKMIDVLAKMEP
KFIEQAMAKGHAKDKLEKIWNDWKAFAEYAFNKSHSTCYAWIAYQTAYLKANYPAEYMAA
VLSNNMSDIKQVSFFMEECKRMGLQVLGPDVNESFYKFTVNDDYAVRFGMGAIKGVGSGA
VATIVENRKDGKYKSIFDLTKRIDLRAANKKALENLALAGGFDSFEGTTRAQYFHDDGDG
ITFYEKAMRYGAKFQENENSSQVSLFGESSDVQIAEPVVPPCEDWSTMEKLAKEKEVVGI
YISGHPLDDFKFEMKYFCNAKLEALKHLEHYVGKTLSFGGIINNVQHRVAKNGKGWASFF
LEGYDESYEFRIFGEEYLKFRHFLIQNNFTYMRVLVKEGWADKETGKKGEPRLQFTLIQY
LQDVLPSFAKKLVLLLNINDIQSDFIQQLNQLFQDNKGDNTVTFEIMELEKITKIVETIS
EIAETDEEVFVEETDIEDVDVPLMETQKISTTTEVEEINVVTKLSMPSRKLKVKISNELL
LELEKRQINFKLN
NT seq
4542 nt
NT seq
+upstream
nt +downstream
nt
atgtacttaatattcgataccgaaaccacaggtttaccaaagcgttgggacgcacccata
accgataccaacaattggccacgctgtattcaaattgcttggcagttgcacgatgatatg
ggaaaactcatcgagcatcaagattatttggtaaaaccagagggattcaacattccttat
gatgcggaacgaattcacggtatttcaactgagttagccgaggctgaaggaatttctttg
gccgaagtgttagaaaaattcaacatcgctttggcgaaagcccaatttattgtcggtcaa
aatttagggtttgacgtcaatattatgggctgcgaattccaccgattaggagtagaatcg
ccaatggcttcgatgcccgttttagacacctgtaccgaagtaacagcttcacttttgcaa
ttgcctggcggacgtggtggaaggtttaaattaccaactttaaccgaattacacagctat
ctttttaaccaaccttttgccgaagcccataacgcgactgccgatgtggaggcaacaacc
cgttgttttttagaattaattcgccgtgatgtttttacaaaagaagaattggatgttccg
gcttcttattttgaagattttaaaaatagaaacccaagaacgattgaatttattggtcta
aaacacatcaatttaaaagaagcttcagatcgaattcgccaacagttcggtgagaaacag
actgagacggtttcaaaagcaacgctttctgaaaataaaaaagcattagttgatactgat
tttgttcatcttcataaccacacccaattctccgttttacaatctacaattagtattgct
gcattggtaaaagcagctgcgcaacaaaaaatgcctgccgttgcaatgactgatcatgct
aatttgatgggcgcctttcattttgttcgggatattttggcccataataaatcggctgca
gccaagaacaagacggcaatcgagaatggagaagaacctactgaagttcctatgaaaccg
attgtaggttgtgagttttttgtgtgcgacaatcataaagataagtctcgaaaagacaat
ggataccaaattgtattattggcgaagactaaaaaaggctatcacaatttggcaaaaatg
tcatcgattgcctataccgaagggttttattatgtgcccagaattgataaaaaagtcatt
caagaatacaaagaagatattatcgttttgtctggaaatctatatggagaaattccaaat
aaagttctgaatttgggagaaaaccaggctgaagaagccttgctttggtggaaaaacgaa
ttccaaaatgatttttatatcgagttgatgcgtcacaatcaggaagatgaaaatcgtgtt
aattcggctttagtaactttggcaagaaaacatgaagtaaagctcgttgcgactaataat
actttttatattgacaaagaaaacgccaatgctcacgatattttattgtgtgtgcgcgat
ggcgaaaagcaaactacaccaataggtcgaggtagaggttaccgatatggtttgcctaat
caagaatattatttcaagtcgggagacgagatgaaacaactcttcaacgatttgccagaa
gccatttctaatattgccgaaattgtcgataaaattgaaatttacgatttagctcgcgat
gttttattgcctaagtttgaaattcctgccgagtttttggttcccgaagatgagatagat
ggaggcaaacgaggtgaaaataagtatttgcgttacctgacttttgaaggggcaaaaaaa
cgttatcccgaaattactcccgaaattcaagaacgcttggattttgagttgatgaccatt
gaaaattcaggttatccagggtactttttgattgttcaagattttatcgctgaggctcgt
aacatgggagtttctgtgggaccaggaagggggtctgctgcaggttcggtggtggcctat
tgtttgaaaattaccaatatagatccgctgaaatacaacctgctttttgagcgtttcttg
aatccagatcgtgtgtcattacccgatattgatattgattttgatgacgaaggtagaagt
agcgttatggattatgtgattcgaaaatacggatccaaacaagtagctcaaattatcacc
tatggtaaaatggctaccaaatcggctattcgtgatacggcgcgtgtattggatttgcct
ttatttgaggccgataaaatcgcgaagttaattccgggtatgatgccgtcaaaatggaat
ttggctcgttttctaaacgaagacgatgcattaattaagaaaacggttcgtccagaagaa
tacgataaaattaaagaattaatagccttggctggcgggaatgatttaggaggcgatacc
attcagcaagccaaagtgttggagggaaacctaagaaatacaggaattcacgcttgtggt
gtgatcattacgcccgatgatattaccaattttgtaccagtagctacagctaaagattct
gatttgtacgtgacccaatttgacaactccgtggtagaaagtgccggcttgttaaaaatg
gactttttgggattgaaaaccctaaccctgatcaaagacacggttaaattggtgaaatac
cgatctggaattgacttgaatcctgatgagtttcctattgacgaccaaaaaacctatgaa
ctatttcaacgtggcgaaaccgtagggattttccaatacgaaagtcccggaatgcagaaa
tacatgaaggaattaaagcctacggtttttcctgatttgatcgctatgaatgcgctatat
cgcccaggtccgattgcctacattccaagttttattaagcgtaagaatggcgaagaacca
attgtttatgatttggacgattgtgaagaattattaaaagacacctacggaattacagtt
taccaagagcaggtaatgcttttgtcccaaaaattagctgacttttctaagggggatgcc
gatgtattgcgtaaagcaatgggaaaaaagatgatcgatgtcttggcgaaaatggaacca
aaattcatcgagcaggcgatggccaaaggacatgctaaagacaaattagaaaaaatttgg
aacgactggaaagcctttgccgaatatgcgtttaacaaatcgcattctacttgttatgct
tggattgcctatcaaaccgcctatttgaaagccaattatccagccgaatatatggcggcg
gtgctttcgaataatatgagcgatatcaaacaagtttcgttctttatggaagaatgtaaa
cgaatgggattgcaggttttaggaccagacgtgaacgagtcattttataaatttacggtt
aatgatgattatgcggttcgtttcggaatgggagcgattaaaggagtaggttcaggagct
gttgctactattgtagagaatcgaaaagacgggaaatacaaatcgatttttgatttgacc
aaacgcattgatttgcgagccgccaataaaaaagctttagagaatttggctttagccgga
ggattcgattcgtttgaagggacaacccgagctcaatattttcatgatgatggcgacgga
attaccttttatgaaaaagcgatgcgttacggagcgaagttccaagaaaatgaaaattca
tcgcaagtaagtttgtttggagaaagtagcgatgttcaaattgctgagcccgtggtgcca
ccttgtgaagattggagcactatggaaaaattagccaaggaaaaagaagtggttggaatt
tatatttctgggcacccattggatgatttcaagtttgagatgaaatacttttgcaatgcc
aaattagaggcgttgaaacacttggaacactatgtagggaagacactttcttttggagga
attataaataatgtgcagcatcgggtggctaaaaatggcaaaggttgggcttcttttttt
ctagaaggatacgatgaaagttacgagtttagaatctttggagaagagtatttgaaattc
cgtcactttttgattcagaataactttacctacatgcgtgtattggttaaagaaggttgg
gcggataaagaaaccggtaaaaaaggagaacctcgtttgcagtttacgctgatccaatat
ttacaggatgtattgccgtcatttgccaaaaagctagtgttattattgaatatcaatgat
attcaatcagattttattcagcaattgaaccagctttttcaagacaataaaggagacaat
acggtaactttcgaaatcatggaattagagaaaattaccaaaattgtcgaaacgatttct
gaaattgccgaaaccgatgaggaggtatttgtagaagaaacggatattgaagatgtagat
gttcctttgatggaaacccaaaaaataagtaccactactgaagtagaagaaatcaatgta
gtgaccaaattgagtatgccaagtcgaaaattaaaagttaaaatatccaacgagttattg
ttggaattagaaaaaagacagattaactttaagttgaactaa
DBGET
integrated database retrieval system
