Flavobacterium ammoniigenes: GENT5_11190
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Entry
GENT5_11190 CDS
T08752
Symbol
recQ2
Name
(GenBank) ATP-dependent DNA helicase RecQ2
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
fan
Flavobacterium ammoniigenes
Pathway
fan03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
fan00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
GENT5_11190 (recQ2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
fan03019
]
GENT5_11190 (recQ2)
03400 DNA repair and recombination proteins [BR:
fan03400
]
GENT5_11190 (recQ2)
Enzymes [BR:
fan01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
GENT5_11190 (recQ2)
Messenger RNA biogenesis [BR:
fan03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
GENT5_11190 (recQ2)
DNA repair and recombination proteins [BR:
fan03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
GENT5_11190 (recQ2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Helicase_C
DEAD
RecQ_Zn_bind
TrmB
DnaD_N
HTH_Cmi2_C
Motif
Other DBs
NCBI-ProteinID:
BDB54814
LinkDB
All DBs
Position
complement(1255392..1257128)
Genome browser
AA seq
578 aa
AA seq
DB search
MKDGICLVISPLVALMKDQVANLQARNIKAIALTGGIRSEEMIDLLDNCQFGNYKFLYLS
PERLQSDWILDRIKNLPINLIAIDEAHCVSQWGHDFRPAYLKISELKKHFQKVPFLALTA
TATPRVKEDIIAETALQNPQIFQKSFARNNIAYMVIEAEDKLYKIEQVLKKNPQPSIIYV
RNRRSCMDLSNQLNAIGFKATYYHGGLSPKEKDKNMALWMQEEVQVIVATNAFGMGIDKA
NVKTVIHIQLPDNIENYYQESGRAGRDGEKAFAILLTSPSDTLQAENQFLSNLPDKAFLN
SIYIKLCNYFQIAYGEGINEQFAFNLNHFCLKYNFPTLKTYNAFQFLDRQGIISLSQEFS
EKIKLQFLIPSKEVLRYISLNPNDEEIMLTMLRAYPGIYEMQTAFNLDFIAKKSNHTSIE
VQAVLQKLKEKNIIEYQAKNNDASLLFNEIREDERTINRVAKYLERQNQLKKEQLQSVIH
YINEKQICKNRLILDYFGEKTATDCGICSYCIGKNKKVKNTNSLAATILSVLQTEELNSR
EIQERIQTDTETVIEILQQLLEQEQIVIKANNKYTIHH
NT seq
1737 nt
NT seq
+upstream
nt +downstream
nt
atgaaagatgggatttgtttggtgatttcgcctttggtagcattaatgaaagatcaggtc
gccaatttacaagcacgcaatatcaaagccattgccttgacaggcggtatccgttctgaa
gaaatgattgatttattagacaattgccagtttgggaattacaaatttttgtatctatct
cccgaacgtttgcaatcggattggattttggatcgcataaaaaatcttccgattaacttg
attgcgatagacgaagcccattgtgtttcgcagtggggacatgattttagaccggcctat
ttaaaaatttccgaactaaaaaaacactttcaaaaagtcccttttttggccttaactgcc
acagctactcctagagttaaagaagatattattgccgaaacagctttgcaaaatccgcaa
atatttcaaaaatcatttgctcgaaacaacattgcctatatggtaattgaggcggaggac
aaactgtataaaatagaacaggtgctcaaaaaaaatccgcaaccctccataatttatgtt
cgtaaccgacgttcttgcatggatttatcgaatcaactaaacgctataggattcaaagct
acctattatcatggtgggctttcgccaaaagaaaaagacaaaaatatggcgctgtggatg
caagaagaagtgcaagtaattgtcgctaccaatgcctttggaatgggaattgacaaagcc
aatgtaaaaacggtaatccacattcaattgccagataatattgaaaattattaccaagaa
tcaggacgtgctggacgggatggcgaaaaagcttttgccattttattgaccagtccatct
gataccttacaagctgaaaatcaatttttatccaatttgcctgacaaagcttttttgaat
tcgatctacatcaaattgtgcaattattttcaaattgcatatggagaaggcatcaatgaa
caatttgctttcaacctgaatcacttttgtttgaaatacaattttccaactttaaaaacc
tataatgcctttcagtttttagaccgacaaggcattattagtttgtctcaggaattttct
gaaaagattaaattgcaatttttaattccttcgaaagaagtactgcgatacattagtttg
aatccaaatgatgaggaaattatgctcaccatgttgagagcctatccaggcatttatgaa
atgcaaactgctttcaatttggattttattgctaaaaaatcaaatcatacgtctattgaa
gttcaagctgttttacaaaaattaaaagagaaaaatatcattgaatatcaagcaaaaaat
aatgatgcgtccctcctttttaacgaaattcgcgaagacgaacgaaccattaatagagta
gcaaaatatttagaaaggcaaaaccagcttaaaaaagagcaattgcaatcagttattcat
tatattaatgagaaacagatttgtaaaaatcggttgattttagattattttggcgaaaaa
acagcaactgattgtggaatttgctcgtattgcattggcaaaaataaaaaagttaaaaac
accaattcacttgctgctaccatactaagcgtattgcaaacagaagaattaaattcgaga
gaaattcaagaaagaatacaaacggatacagaaacagtcattgaaattctgcagcaattg
ttagaacaagaacaaatcgtcatcaaggcgaataacaaatatacaattcatcactaa
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