Flavobacterium ammoniigenes: GENT5_13470
Help
Entry
GENT5_13470 CDS
T08752
Name
(GenBank) exonuclease
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
fan
Flavobacterium ammoniigenes
Pathway
fan03030
DNA replication
fan03430
Mismatch repair
fan03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
fan00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
GENT5_13470
03430 Mismatch repair
GENT5_13470
03440 Homologous recombination
GENT5_13470
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
fan03032
]
GENT5_13470
03400 DNA repair and recombination proteins [BR:
fan03400
]
GENT5_13470
Enzymes [BR:
fan01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
GENT5_13470
DNA replication proteins [BR:
fan03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
GENT5_13470
DNA repair and recombination proteins [BR:
fan03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
GENT5_13470
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
GIY-YIG
GIY_YIG_2
DEDDh_C
RNase_H_2
Rv2179c-like
DNA_pol_A_exo1
T5orf172
Motif
Other DBs
NCBI-ProteinID:
BDB55042
LinkDB
All DBs
Position
complement(1501296..1502657)
Genome browser
AA seq
453 aa
AA seq
DB search
MYCILDIETTGGQFNEEGITEIAIYKFDGHEVVDQFISLVNPEIPIQPFVVKLTGINNAM
LRSAPKFFEVAKRIIEITSDCIIVAHNASFDYRILRTEFKRLGYDFQAKTLCTVELSKKL
IPDQPSYSLGKLVRALGIPMSDRHRASGDAIATTKLFKMLLEKDVEKQILNDYIKQEIQK
GIAPKLLDIVEHLPSKTGIYYIHNEKGDLIYIGKSRNIKKRINQHFTGTSTKSKKIQREV
YSVTPEETGSELIALLKESEEIKINKPVYNRAQRKSIFEWALYTEKDSSGYLNLRLQKVD
GRKKEITSFTTLQEGKNALFRITEKYHLCQKLTGLYQTNADCFQYKIKECDGACIGKITP
EEYNARVQKFITENSFENKNIVILDRGRNINERSVVLIENGIYKGYAFYDLNYQVTNIDV
LKNILIPMQHNRDAKTIIQGQIRKSKSLKVISF
NT seq
1362 nt
NT seq
+upstream
nt +downstream
nt
ttgtactgtatacttgacatagaaactaccggaggtcaattcaacgaagaaggaattacc
gaaatcgccatttacaaatttgatggtcacgaggtggtggatcaattcatcagtttagtc
aatcccgaaatacccattcagccttttgtggtcaaattgacaggaattaataacgccatg
ttgcgttcggcacccaaattttttgaagtggccaaacgcattatcgagatcacttctgat
tgtatcatcgtggcacacaatgcctcctttgactaccgaattttacgaaccgaattcaaa
cgtctaggctatgattttcaagccaaaacattgtgtaccgtagaattgtctaaaaaatta
attccggaccaaccttcttacagtttaggtaaattagttcgtgccttgggtattccaatg
tccgaccgacaccgagctagtggcgatgccatagcaaccaccaaattgttcaaaatgctt
ttggaaaaagatgtagaaaagcaaatattaaacgactatatcaaacaggaaattcaaaaa
ggaattgcgccaaaattgttggatatagtagaacatttaccttccaaaacaggaatatat
tacattcataacgaaaaaggcgatttaatttacattggcaaaagccgcaacattaaaaag
cgaatcaaccagcattttacaggaacttcaaccaagtctaaaaaaatacaacgagaagtt
tattcggttactcccgaagaaacgggtagcgaattgattgcgcttttaaaagaaagcgaa
gaaatcaaaatcaataagcccgtttataatcgtgcccaacgcaaaagtatctttgaatgg
gctttgtatactgaaaaagacagcagtggttacttgaatttgagactccaaaaagtcgac
ggtcgcaaaaaagaaatcacctcttttaccactttacaagaaggtaaaaatgcccttttt
cgcattaccgaaaagtaccatttgtgccaaaaattaacgggtttataccaaaccaatgcc
gactgttttcaatacaaaatcaaagaatgtgatggcgcttgtattggcaaaatcacccct
gaagaatacaatgcacgagttcaaaaattcattaccgaaaatagtttcgaaaacaaaaat
atcgtgatacttgaccgtggccgaaacattaacgaacgttccgttgtgcttattgaaaat
ggcatttacaaaggctatgcgttttacgatttgaattatcaagtgaccaacattgacgtc
ttaaaaaatattttgattcctatgcaacacaaccgcgatgccaaaacaattattcaagga
caaattaggaaaagtaaatcgctaaaagtaatttcgttttaa
DBGET
integrated database retrieval system
