Flavobacterium ammoniigenes: GENT5_15510
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Entry
GENT5_15510 CDS
T08752
Symbol
uvrD
Name
(GenBank) DNA helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
fan
Flavobacterium ammoniigenes
Pathway
fan03420
Nucleotide excision repair
fan03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
fan00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
GENT5_15510 (uvrD)
03430 Mismatch repair
GENT5_15510 (uvrD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
fan03400
]
GENT5_15510 (uvrD)
Enzymes [BR:
fan01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
GENT5_15510 (uvrD)
DNA repair and recombination proteins [BR:
fan03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
GENT5_15510 (uvrD)
MMR (mismatch excision repair)
Other MMR factors
GENT5_15510 (uvrD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PcrA_UvrD_tudor
Viral_helicase1
AAA_30
ResIII
nSTAND3
DUF4939
Motif
Other DBs
NCBI-ProteinID:
BDB55246
LinkDB
All DBs
Position
1724767..1727103
Genome browser
AA seq
778 aa
AA seq
DB search
MQHYIDQLNEAQREPVLQKDGPMIIIAGAGSGKTRVLTIRIAYLMSQGVDAFNILSLTFT
NKAAREMKNRIASIVGASEAKNLWMGTFHSVFARILRSEAEHLGYPSNFTIYDSQDSVRL
ISSIIKEMQLDRDIYKPKQVLGRISSYKNSLITVKAYFNNPELQEADAMSKKPRLGEIYQ
NYVERCFKAGAMDFDDLLLKTNELLTRFPEILAKYQNRFRYILVDEYQDTNHSQYLIVRA
LSDKFQNICVVGDDAQSIYAFRGANINNILNFQKDYEGVKTFRLEQNYRSTRNIVEAANT
IIDKNKTKLDKIVWTANDFGPKIKVHRSLTDAEEGRFVASTIFEQKMQNQMLNGQFAILY
RTNAQSRAMEDALRKRDIPYRIYGGLSFYQRKEIKDVLCYLRLIINPKDEEALIRVINYP
ARGIGDTTVEKLTIAANHYKRSIFEVMQNIDKIDLKLNSGTKQKLTDFVTMIKSFQIINE
NQDAFYITDHVAKKTGLVQELKKDATPEGMAKIQNIEELLNGIKDFTEGQKEIDGARGAL
SEFMEDVALATDLDKDTSDEDRVALMTIHLAKGLEFPHVFVVGMEEDLFPSAMSMSTRSE
LEEERRLFYVALTRAEHQAYLTYAQSRYRWGKLTDSEPSRFVEEIDSQYLEYLTPAESNY
RYKPMIDSDIFGDIDKSKLRLAKPVSGIPPKYITDNQPKPDSPIRRLKPVTGNAPNSSNA
NLFDNKLVAGNIVMHERFGKGEVINMEGVGADRKAEIRFEVGGIKKLLLRFAKLEIIG
NT seq
2337 nt
NT seq
+upstream
nt +downstream
nt
atgcagcactatattgatcaattgaacgaagcgcaacgcgaaccagtccttcaaaaagac
ggcccaatgattatcattgccggtgccggttctggtaaaacgcgagtgttgactattcgt
attgcctatttgatgagtcaaggcgtggacgcgtttaatattttgtcattgacctttacc
aacaaagcggcacgcgaaatgaagaatcgtattgcgtctatcgttggtgctagtgaagct
aagaatctttggatgggaacctttcactcggtttttgctcgcatcttacgttcagaagca
gagcatttgggttatccgtctaattttaccatctacgattcgcaagattcagtacgtttg
atttcttcgattatcaaggaaatgcaattggatcgagatatctacaaacccaaacaggtt
ttgggccgaatatcttcttataaaaacagcctgattacagtaaaagcctactttaataac
ccagaattacaagaagccgatgcgatgtccaagaaaccgcgtttaggcgaaatttatcaa
aattatgtagagcgttgtttcaaagcaggagcaatggactttgatgatttattattgaaa
acgaatgagttactgactcgattcccagaaattctagccaaataccagaatcgtttccgt
tatattttggtcgatgagtaccaagataccaatcattcgcagtatttgattgttcgtgct
ttgtcggataaatttcaaaatatctgtgtggtaggtgatgatgcacagagtatttatgct
ttccgtggtgccaacatcaataatattttaaatttccaaaaggattatgaaggggtaaaa
acctttcgattggaacaaaattaccgttcgactcgaaatatcgtggaagccgcgaatacc
attattgataaaaataaaactaaactggataagattgtttggacggccaatgattttggt
cccaaaataaaagtgcatcgcagtttgaccgatgcggaagaaggccgttttgtagctagt
acaattttcgaacagaagatgcaaaaccaaatgctaaatggtcaatttgcaattttgtac
cgaaccaatgcacaatcgcgtgctatggaggatgcccttcgtaaacgtgatattccgtac
cgaatttatggaggtctttctttttaccaaagaaaagagatcaaagatgtcttgtgctat
ttgcgtttgatcattaatccaaaggatgaagaagctttaattcgggtgattaattaccct
gctagaggaataggggatacgactgtcgaaaagttgactattgcagccaatcattataag
cgttcgatttttgaagtgatgcaaaacattgacaaaatcgacttgaaactgaattcggga
accaagcaaaaattgaccgactttgttactatgatcaagagttttcaaattattaatgaa
aaccaagatgctttttatattactgatcatgtggccaaaaaaaccggtttagttcaagaa
ttgaaaaaagacgctacacccgagggtatggccaaaattcaaaacattgaggaattactg
aatggtattaaggattttaccgaaggtcaaaaagaaatagatggcgcacgtggtgcttta
tccgaattcatggaagacgtggctctggcaaccgatttagataaagatacgagtgatgaa
gatcgtgtggcgttaatgactattcacttggccaaaggattagagtttccgcacgttttt
gtggtgggaatggaagaagatttgtttccaagtgcgatgagtatgagtacgcgttcggaa
ttagaagaagaacgtcgtttgttttatgtggcactcactcgagccgaacatcaagcgtat
ttgacttatgcacaatcccgttaccgctggggaaaattaacagatagcgaaccttcgcgt
ttcgtagaagaaatagatagtcaatatttggaatatttaacgcctgccgaatccaattac
cgctacaaaccgatgattgatagtgatatttttggagatattgataagtcaaaattgcgt
ttggccaaaccagtttctggaatacctcctaaatacattaccgataaccaacccaaaccc
gatagtcccattcgtagattaaaaccggttactggaaacgcacccaattccagtaatgcc
aatttatttgataataaattagtggcaggaaatattgtgatgcacgaacgttttggcaaa
ggtgaagtaattaatatggaaggcgtgggtgccgatagaaaagcggaaattcgttttgag
gtgggaggtattaagaaactcttattgcgttttgcaaagttggagataattggataa
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