Flavobacterium ammoniigenes: GENT5_15560
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Entry
GENT5_15560 CDS
T08752
Symbol
holA
Name
(GenBank) DNA polymerase III subunit delta
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
fan
Flavobacterium ammoniigenes
Pathway
fan03030
DNA replication
fan03430
Mismatch repair
fan03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
fan00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
GENT5_15560 (holA)
03430 Mismatch repair
GENT5_15560 (holA)
03440 Homologous recombination
GENT5_15560 (holA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
fan03032
]
GENT5_15560 (holA)
03400 DNA repair and recombination proteins [BR:
fan03400
]
GENT5_15560 (holA)
Enzymes [BR:
fan01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
GENT5_15560 (holA)
DNA replication proteins [BR:
fan03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
GENT5_15560 (holA)
DNA repair and recombination proteins [BR:
fan03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
GENT5_15560 (holA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta
DNA_pol3_delta_C
UPF0113
Motif
Other DBs
NCBI-ProteinID:
BDB55251
LinkDB
All DBs
Position
1730303..1731238
Genome browser
AA seq
311 aa
AA seq
DB search
MGEEPYYIDKLSDYIEQNVLTEEEKGFNQTVLYGRDVTIDDIVSTAKRYPMMAERQVVIV
KEAQDLSRTIDKIESYVENPMETTVLVFCYKYKTLDKRKKVTKLLGQKGIVYESKKLYEN
QVGDWIKRVLAGKKYSIEPKATAMLVEFLGTDLSKINNELEKLQIILPVGSTINPQHIEE
NIGFSKDFNNFELLNALGSRNQAKAFHIAQYFANNPKANPLVVTTSTVFGFFVKILKYHG
LKDRNPSKVASALGVSPYFLKDYDVALKNYPMKKVSQIITSLRNVDVKSKGVGASMSQSD
LLKEMLYTIFN
NT seq
936 nt
NT seq
+upstream
nt +downstream
nt
atgggtgaagagccgtattatatcgataaattatccgattatattgagcaaaatgtgttg
actgaagaggaaaaaggcttcaatcaaaccgttttgtatggtcgcgatgtgacaattgac
gatattgtttcgactgcaaaacgctaccccatgatggccgaacgccaagtggtcattgtg
aaagaagcacaagatttgtcaagaacaattgataaaattgaatcgtatgtagaaaatcca
atggaaactactgttctcgttttttgttataaatacaagacattagacaagcgtaaaaaa
gtcactaagttattaggtcaaaaagggatcgtttacgaaagtaaaaaactgtatgagaat
caagttggcgattggataaaacgcgttttggcaggaaaaaaatattcgattgaaccaaaa
gctactgccatgttggtcgaatttttagggacagatttgagtaaaatcaataacgaatta
gaaaaattgcaaattatacttcctgttggcagtaccattaatccgcagcatatcgaagaa
aatattggatttagtaaggactttaataatttcgaattacttaatgccttaggttctcgc
aatcaagcaaaagcatttcatattgcacagtattttgccaacaatccaaaagccaatcct
ttggtggtaaccacaagtactgtttttggtttttttgttaaaatccttaaataccatgga
ttaaaagatagaaatccctctaaagtagcttctgcattaggtgttagtccttatttttta
aaagattatgatgtagctttgaaaaattacccaatgaagaaagtaagccaaattataact
tcgcttcgaaatgtagatgttaaaagtaaaggagtgggagcaagcatgtcacaatcagat
ttattaaaagaaatgttatatacaatatttaattaa
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