Flavobacterium ammoniigenes: GENT5_17060
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Entry
GENT5_17060 CDS
T08752
Symbol
rimK
Name
(GenBank) alpha-L-glutamate ligase
KO
K05844
ribosomal protein S6--L-glutamate ligase [EC:6.3.2.-]
Organism
fan
Flavobacterium ammoniigenes
Brite
KEGG Orthology (KO) [BR:
fan00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
fan03009
]
GENT5_17060 (rimK)
Ribosome biogenesis [BR:
fan03009
]
Prokaryotic type
ribosomal protein modification factors
GENT5_17060 (rimK)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RimK
Rimk_N
Zn_protease
GSH-S_ATP
ATPgrasp_ST
ATP-grasp_3
R2K_3
Dala_Dala_lig_C
GARS_A
ATP-grasp
D123
ATPgrasp_Ter
Motif
Other DBs
NCBI-ProteinID:
BDB55401
LinkDB
All DBs
Position
complement(1897972..1899339)
Genome browser
AA seq
455 aa
AA seq
DB search
MSDNKVVLGSEEWCSFPELGIPAIKARVDSGAKTSALHAINIAPFVKNDSNWVKFDINPI
QNNVRTIIHCEAPLIDKRIVKSSSGYREQRYVIQTILKLGDQNWEIEMTLTNRDSMGFRM
LLGREAMIGRVVVDPEKQYLLDSPTEEDLTEVYKGAVKEKSGLHIGLLASNPELYSNKRI
MEAGEMRGHEMHFLNIKECYIKLDAKKPEIHYRGGKILNQFDAIIPRIRPSATFYGCALT
RQFEALKVFCLNSSSAITQSRDKLYSLQLLLNHGVDIPTTGFANSPLDTDDLITMVGGPP
LIVKLLEGTQGKGVVLAETKKAAESVINAFKSINANILVQEFIKEANGKDIRCFVVDGKV
VAAIQREALPGEFRANIHLGGTASVVKVTQDEKRIAIKAAKAMNLKVAGVDIIRSSKGPL
LLEVNSSPGLEGIEGATNKDIAGKMIRAIEKHFKL
NT seq
1368 nt
NT seq
+upstream
nt +downstream
nt
atgtctgataataaagttgttcttggaagtgaagaatggtgttcttttcctgaattagga
ataccagcaattaaagctcgtgtagattctggcgcaaaaacttctgcacttcatgctata
aatattgctccatttgttaaaaatgacagcaactgggttaaatttgatatcaatcccatt
caaaataatgtgcgcacaataattcattgtgaagcacctttaattgataagcgcattgtt
aaaagttcaagcggatatagagaacaacgttatgttattcaaactatccttaagttgggt
gatcaaaattgggagattgaaatgacccttaccaatagagattcaatgggtttccgaatg
ctactaggtagagaagcaatgatcggtcgagtagtagttgatcctgaaaaacaatattta
ttagactcaccaactgaagaagacttaacagaagtttacaaaggtgctgtaaaagaaaaa
tcagggcttcatattggtcttttggcaagtaatcctgaattgtatagtaataagagaatt
atggaagcgggtgaaatgcgtggccatgaaatgcattttttaaatattaaagaatgttat
ataaaattggatgccaaaaaacctgaaattcattaccgaggcggtaagattttaaatcaa
tttgatgcaattattccaagaataagacctagcgctactttttatggttgtgccctaacg
cgacaatttgaagcattaaaagttttttgtttgaattcgtccagcgcaataacacaatct
agagataaattgtatagtttacagttattgttaaatcatggtgtagacattccaactaca
ggatttgcaaattctccactcgatacagatgatttgattaccatggtaggaggaccccct
ttgattgttaaattattagaaggtactcagggtaaaggagtagttttagcagaaactaaa
aaagctgctgagagtgttatcaatgctttcaaaagtattaatgctaatatacttgtccaa
gaatttataaaagaagccaacgggaaagatattcgctgttttgtagttgatggcaaagtt
gtagcggctattcaacgggaagcattacctggtgaatttagagctaacattcatttaggt
ggaaccgcatctgtggtgaaagttacacaagatgaaaaaagaattgcaattaaagctgct
aaagccatgaatcttaaagttgcgggagtagatataattcgttcttccaaaggccctttg
ttattagaggttaattcgtctccaggtcttgaaggaattgaaggagcaaccaataaagac
attgccggaaaaatgattagagccatagaaaaacatttcaaattataa
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