Flavobacterium ammonificans: SHINM13_00100
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Entry
SHINM13_00100 CDS
T08737
Symbol
pabC
Name
(GenBank) aminodeoxychorismate lyase
KO
K07082
peptidoglycan lytic transglycosylase G [EC:
4.2.2.29
]
Organism
fao
Flavobacterium ammonificans
Brite
KEGG Orthology (KO) [BR:
fao00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
fao01011
]
SHINM13_00100 (pabC)
Enzymes [BR:
fao01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.29 peptidoglycan lytic transglycosylase
SHINM13_00100 (pabC)
Peptidoglycan biosynthesis and degradation proteins [BR:
fao01011
]
Peptidoglycan biosynthesis and degradation
Lytic transglycosylase
SHINM13_00100 (pabC)
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Gene cluster
GFIT
Motif
Pfam:
YceG
Motif
Other DBs
NCBI-ProteinID:
BDB55714
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All DBs
Position
complement(9451..10491)
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AA seq
346 aa
AA seq
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MNFKKAITTVTIVLISGLIIYGLILVNQIFSSNTKFEEAEMYVYIPTDSDYESVKKIVAP
YVDDIERFDAVAYKKKYPNNVKPGKFLFKKGMNSNELINALRINTEVKLSFNNQERLEDF
AGRIGSEIEADSLSLLTVFKDATFLAENGFNEDNVLTMFIPNTYELYWNTTAVKFRDKMI
KEYRNFWNEERVAKAKAQGLTPIEATILASIVHKESVKKDERPRIAGVYLNRLHRGILLQ
ADPTVIFAVKKKSNDFKQVIKRVLNKDLQVASPYNTYYSAGLPPGPIAMPDISAIEAVLN
PEKHNFIYFCASVTRFGYHDFAVTQAEHEQNAKKYYNWINSQGVKR
NT seq
1041 nt
NT seq
+upstream
nt +downstream
nt
ttgaatttcaaaaaagctataactacagttactattgttcttatttcaggtcttattatt
tatggtttaattttagtaaaccaaattttctcttcaaatactaaattcgaagaagctgaa
atgtatgtttatattccaacggattcggattacgaatcagttaaaaagattgtagcacct
tatgtagatgacattgaaagatttgatgctgtagcatataaaaagaaatatccgaataat
gtaaagccaggtaagtttctattcaagaaaggaatgaatagcaacgaattaattaatgct
ttacgaatcaatactgaagtaaaactctcgttcaataatcaagagcgtttggaagatttt
gctggaagaataggttctgaaatagaagcagatagtctttcattattgacggtttttaag
gatgctacttttttggcagaaaatggatttaatgaagacaatgttttaacaatgtttatt
ccgaatacctatgaattgtattggaatactacagcggtaaaattccgagataaaatgatt
aaggaataccgcaatttttggaatgaagagcgagttgctaaagctaaagcgcaaggattg
actcctattgaggccactattttggcttctattgttcataaagaatcggttaaaaaggat
gaaagacctagaattgcaggggtatacttgaatcgtttacacagaggtattttgttacaa
gcagacccgaccgtaatttttgcagttaaaaagaaatccaatgactttaagcaggtaatt
aaaagagtattgaataaagatttacaagttgcttcgccttacaacacttattatagtgct
ggcttaccaccaggtccaattgcaatgccagatatatcagcaattgaggcggttttaaat
ccagaaaaacacaacttcatttatttttgcgcgagcgtaactcgttttgggtatcatgat
tttgccgtaacccaagctgaacacgaacaaaatgccaaaaaatattacaattggattaat
agtcaaggagtgaaaagataa
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