Flavobacterium ammonificans: SHINM13_00120
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Entry
SHINM13_00120 CDS
T08737
Symbol
dapF
Name
(GenBank) diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
fao
Flavobacterium ammonificans
Pathway
fao00300
Lysine biosynthesis
fao00470
D-Amino acid metabolism
fao01100
Metabolic pathways
fao01110
Biosynthesis of secondary metabolites
fao01120
Microbial metabolism in diverse environments
fao01230
Biosynthesis of amino acids
Module
fao_M00527
Lysine biosynthesis, DAP aminotransferase pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
fao00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
SHINM13_00120 (dapF)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
SHINM13_00120 (dapF)
Enzymes [BR:
fao01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
SHINM13_00120 (dapF)
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GFIT
Motif
Pfam:
DAP_epimerase
CntK_N
DUF5640
Motif
Other DBs
NCBI-ProteinID:
BDB55716
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Position
complement(11047..11829)
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AA seq
260 aa
AA seq
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MQIEFYKYQGTGNDFVMIDNRAGIFPKENTELVAHLCDRRFGIGADGLILLDTDADTDFR
MVYYNSDGNLSSMCGNGGRCLVAFAKKLNIIQNETTFIASDGLHYATVSEENIVSLQMID
VTEIKNTSEYSFLNTGSPHHVQLVADLENYNVKENGATIRYGDLYGKEGSNINFVKKINE
NTFSLRTYERGVEGETLACGTGATAVAIAMNATGQTNLNAINLNVEGGKLSVSFDIENGK
YTNVFLKGPAEFVYKGRIEI
NT seq
783 nt
NT seq
+upstream
nt +downstream
nt
atgcaaatagaattttataaataccaaggaacgggaaacgattttgttatgattgacaat
cgcgctggtattttcccaaaagaaaacacagaattagttgcgcatttgtgtgacagacgt
tttggaattggtgccgatggattgattttgttggatactgatgcagataccgatttcaga
atggtgtattacaattcagatggtaatttgagttctatgtgtggtaatggtggacgctgt
ttagtcgcttttgcaaaaaaactgaatataattcaaaacgagactacatttattgcttcg
gatggtttgcattatgcgacagtttctgaagagaatattgtatcattacaaatgattgat
gtgactgagattaaaaatacatccgaatattcttttttgaatacaggttctcctcatcat
gttcaattggtagcagatctagaaaattacaatgtcaaagaaaatggcgctaccattcga
tatggagacttgtatgggaaagaaggtagtaatatcaattttgtaaaaaaaattaacgag
aacactttttctttgcgaacctatgaaagaggagtagagggagaaaccttagcttgtggt
acaggagcaactgctgttgcaattgctatgaatgcaactggacaaacaaatttaaacgct
attaatttgaatgttgaaggtggcaaattatcagtttcatttgatattgaaaatggaaaa
tatactaacgtatttttgaaagggcctgcagagtttgtttataaaggaaggattgaaata
taa
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