Flavobacterium ammonificans: SHINM13_00180
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Entry
SHINM13_00180 CDS
T08737
Name
(GenBank) peptidoglycan endopeptidase
Organism
fao
Flavobacterium ammonificans
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
LysM
NLPC_P60
LysM2_CERK1_LYK3_4_5
LysM2_NFP
CHAP
Motif
Other DBs
NCBI-ProteinID:
BDB55722
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Position
complement(18467..19954)
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AA seq
495 aa
AA seq
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MKINEQMKYYLLLFIFTLVNSSLVFSQEKLIKHTVKKGETITAIAQKYKIEPSAIYELNP
DCSRTLKVESIILIPRTTSKVIKSKTESKTVIVENTHEVQPKETLFGIAKQYEISLEELN
AANPELVETGLKAGQKIKIPSKVITKIVTENKKETAKLEPIKEVVLIEKKEKSVTLPHTK
QTESTIHQVVASETKFGIAKQYGISVNDLDKANPILEKEALKVGQKIVIPIKEGVAAVTT
VVKPIETVPVKSIGVQENTKVKEEVVTVKKEAIEENVATISYEVLPKETKYGIAKKYGIS
VSELEIQNPSIAKNLYVGAKLKIVGAKAIQEEVSDDTKLIAETTNQTDANQENLTIASSL
AKWNTSEELADELIRMASDNLGSRYRSGGTSKNGFDCSGLMYATFSSLDIKLPRSSHQMA
TIGTVVDPNQAQKGDLIFFKTRGANQINHVGMIVEVNDGEIKFIHSATHGGVIISSTKEK
YYEKNFTQINRVLQQ
NT seq
1488 nt
NT seq
+upstream
nt +downstream
nt
atgaaaattaatgaacaaatgaaatactacctattattatttatttttacacttgttaat
tcttcgttggttttttctcaagagaagttgataaaacatactgtaaaaaaaggagaaaca
atcactgccattgctcagaaatataaaatagaacctagtgctatttatgaacttaacccg
gattgcagtcgaacattaaaagtagaatccattattttaattccacgcacgacatctaag
gttattaaatcaaaaacagaatcaaaaactgtaattgttgaaaacactcacgaagttcag
cctaaagagactttatttggtattgcaaaacaatatgagatttctttagaagaacttaat
gccgccaatccagaattagtagaaacgggtttaaaggcaggacaaaaaataaaaatacct
tctaaagttattacaaagattgttacagagaataagaaagaaacagcaaaattagaacct
ataaaagaagtagttctaatagaaaaaaaagaaaagagtgttactttacctcatactaaa
caaaccgaatcaacaatacatcaagttgtagcatcagaaacaaaattcggaatagcaaaa
caatatggaatttcagtaaatgatttggataaagctaatccgatattagaaaaggaagcc
ctaaaggtgggacagaaaatcgtgattcccataaaagaaggtgttgcagcagttactaca
gttgtaaagccaattgagactgtgccagtaaaatcaattggagttcaagaaaataccaaa
gtcaaagaggaagttgtaacagttaaaaaggaagcaattgaagaaaatgtagcgactatt
tcgtatgaagtgcttccaaaagaaactaaatatggaattgccaaaaagtatggaatttcg
gtttcggaattagaaatacagaatccttctattgctaaaaatttatatgttggcgctaaa
ttgaaaattgttggtgcaaaagcgattcaagaagaagtttcagatgatactaaattaatt
gctgaaacgacgaatcaaacagatgcaaatcaagagaatttaaccattgcgagtagtttg
gcaaaatggaatacgagcgaggaacttgctgatgaattaattcgaatggcatcagataat
ttgggatcaagataccgttcaggaggaacttcaaaaaatggttttgactgctccggttta
atgtatgctacttttagttctctggatattaaattacctagatcctcacatcagatggct
accattggtactgtagtcgatcctaatcaagctcaaaaaggtgatttgatattcttcaag
actagaggagctaatcaaattaaccatgtggggatgatagtagaggtaaatgatggcgaa
ataaaattcattcactctgctactcatggcggtgtaataatatcatctacaaaagaaaag
tattatgagaagaattttactcaaataaatagggtgcttcagcagtaa
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