Flavobacterium ammonificans: SHINM13_01210
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Entry
SHINM13_01210 CDS
T08737
Symbol
murD
Name
(GenBank) UDP-N-acetylmuramoylalanine--D-glutamate ligase
KO
K01925
UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:
6.3.2.9
]
Organism
fao
Flavobacterium ammonificans
Pathway
fao00470
D-Amino acid metabolism
fao00550
Peptidoglycan biosynthesis
fao01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
fao00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
SHINM13_01210 (murD)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
SHINM13_01210 (murD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
fao01011
]
SHINM13_01210 (murD)
Enzymes [BR:
fao01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.9 UDP-N-acetylmuramoyl-L-alanine---D-glutamate ligase
SHINM13_01210 (murD)
Peptidoglycan biosynthesis and degradation proteins [BR:
fao01011
]
Precursor biosynthesis
Amino acid ligase
SHINM13_01210 (murD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
MurD_N
MurD-like_N
DUF6558
AlaDh_PNT_C
DUF2097
Motif
Other DBs
NCBI-ProteinID:
BDB55825
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All DBs
Position
complement(144237..145571)
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AA seq
444 aa
AA seq
DB search
MRLVVLGGGESGVGTAILGKKKGYDVFVSDFGKIKESYKEVLNHNGIAWEEEMHTESLIL
NADVVMKSPGIPEKSPIVKKLFEKGIKVISEIEFAAPYTKAITIGITGSNGKTTTTMLTY
HLLKSAGLNVGLGGNIGKSFAWQVADNDFDSYVLELSSFQLDGIIDYKPHIAILTNISPD
HLDRYEYKYENYINSKFRITMNQTEEDYLIYDAEDEAITNWLKNNTTKATLIPFSLNQVF
TEGAYIKDNKIEVKMMNHEEFSMETETIALEGKHNMKNAMAATSVAKLMQIRNATIRESL
SNFQGVEHRLEKVLKIQNVQYINDSKATNVNASFFALDSVTTPTVWIVGGVDKGNDYNEL
MSLVNEKVKGIICLGVDNKKIIEAFGNIVDVMVEVDNMPDAVRMAQRMTEKGDTVLLSPA
CASFDLFENYEDRGKQFKQAVYNL
NT seq
1335 nt
NT seq
+upstream
nt +downstream
nt
atgcgattagttgttttaggaggaggagaaagtggagtaggtactgccattcttggcaag
aaaaaagggtatgatgtttttgtatctgattttggtaaaataaaggaaagttataaagaa
gttcttaatcataatggaattgcttgggaggaagaaatgcatacagaatcactgattcta
aatgctgatgtggtgatgaaaagcccgggaattcccgaaaaatcaccgatagtaaaaaaa
ctgtttgagaaaggaattaaagtaatctcagaaattgaattcgcagctccttacactaaa
gcaataacaataggaataactgggagtaatggtaaaaccactactacaatgttgacttat
catttgctaaaatcagcaggcttgaatgtaggtctaggtggaaatattggtaaaagtttt
gcctggcaggtggctgacaacgattttgattcttacgttttagagctaagcagttttcaa
ttggacggaattattgattacaagccacacattgcaattctaacgaatattagtccagat
catttggatcgttatgaatataagtatgaaaattacatcaattctaagtttagaattaca
atgaatcaaaccgaagaggattatttgatttatgatgcagaagacgaagcaataacaaat
tggttgaaaaataatacaacaaaagcaacactaattcctttttcattgaaccaagtgttc
actgaaggggcttatataaaagacaataaaatcgaagtaaagatgatgaatcacgaagaa
ttttcaatggaaactgaaacaattgcgttagaaggaaaacacaatatgaaaaacgcaatg
gcggctacttcagtggctaaattaatgcaaattagaaatgcaaccatcagagagagtttg
tcaaattttcaaggagtagagcatcgtctagaaaaagtattgaaaatccaaaatgtacaa
tatatcaacgattctaaagcaacaaatgtgaatgcttctttctttgctttggatagtgta
actaccccaacagtttggattgtcggtggtgttgataaaggaaatgactataacgaattg
atgtcattggtcaacgaaaaagtgaaaggaattatttgtttgggcgttgataataaaaaa
attattgaagcttttggtaatatagttgatgttatggtagaggtagataacatgccagat
gcagttagaatggcgcaacgcatgaccgaaaaaggagatacggttttgttgtctccagct
tgtgctagttttgatttgtttgaaaattatgaagatagaggcaaacaattcaaacaagca
gtatacaatttatag
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