Flavobacterium ammonificans: SHINM13_02020
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Entry
SHINM13_02020 CDS
T08737
Symbol
bamA
Name
(GenBank) outer membrane protein assembly factor BamA
KO
K07277
outer membrane protein insertion porin family
Organism
fao
Flavobacterium ammonificans
Brite
KEGG Orthology (KO) [BR:
fao00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03029 Mitochondrial biogenesis [BR:
fao03029
]
SHINM13_02020 (bamA)
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
fao02000
]
SHINM13_02020 (bamA)
Mitochondrial biogenesis [BR:
fao03029
]
Mitochondrial protein import machinery
Outer membrane
TOB/SAM complex
SHINM13_02020 (bamA)
Transporters [BR:
fao02000
]
Other transporters
Pores ion channels [TC:
1
]
SHINM13_02020 (bamA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
POTRA
Omp85
POTRA_2
SIMPL
Motif
Other DBs
NCBI-ProteinID:
BDB55906
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Position
231277..233982
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AA seq
901 aa
AA seq
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MEKQANKLNNFLVLHKSIQLVLSLLLFGFFFQASAQERVPFDQGKKYFLADVNVVGKITF
NSQTVVTFTGLEKGSEISVPGEEISSAIKKLGKLGLFNEISFYVNKVENDSIYLDLHLEE
LPKLNKVRIVGVKKNKIEGLIKDNGLTENKVVNENLITTTKNYIENKYKKDGFFNTKVNV
NTVQDTSTVNQVNMLVSIDKGTKVKIDKIDFIGNSKLSDKALKKAMKDTKQKKFTRIFKA
SKFIKDKYKTDLEKVIDVYKEKGFRDARIISDTVSYNKEKNALAVGIKVEEGNRYYFGDI
KFLGNTVYSDQGLSKALGLRKGDVYNGVLLEKRIADKTKPDGEDITNLYQNNGYLFSSIN
AVEVKTANDTIDFEIRVTEGPIAYFNKITVVGNDKTNDQVIYRELRTKPGEKYSKEQLVR
TIREIGQLGFFDPETIDPKFKNVDSGAGTVDIEYNLAEKGASQIELQGGYGGGGFIGTLG
LSFNNFSAKNMFNKSAYRPLPMGDGQKVSLRLQASTFFRTYSASFSEPWFGGKKPVQFNS
SISYSQQYLNNFITFEVDRTKSFNILTLSVGIAKRLTVPDDFFVLSQSVSYQHYELNNYN
TGLFTFGDGTSRNLAYTIGITRNNKGVNPIFPTYGSEFSFSAKFTPPYSLFDNVNYATIG
SQEEYKFKYTGSPYTGPNGILVNEGDYLESLPSSTNPFPNRVARFQDGAADPSKVDQQKF
NWLEYYKVKFKADWYTKLFGKLVMRSLSEFGFLGAYNQSRGSIPFERFFLGGDGMQMFAM
DGRETIQLRGYPNNSITPINSNGEQLGATIYNKFSLEMRYPITLKASASIYALAFLEAGS
SYDSFRNYNPFALNRSAGVGLRVFMPAFGLLGIDFAKGFDALPGQSAPNGWETHFIIGQQ
F
NT seq
2706 nt
NT seq
+upstream
nt +downstream
nt
ttggaaaaacaagcgaacaaattaaataattttttagtgttacataaaagcatacaatta
gttcttagcctattattatttggattttttttccaagctagtgcgcaagaaagagtccca
tttgatcaaggcaaaaaatattttcttgctgatgtcaatgttgttggtaagattactttt
aattctcaaacagtagtaacttttactggacttgaaaaagggagcgaaattagcgttcct
ggtgaagaaattagttcggcaatcaaaaagctaggtaaactaggcttgttcaatgaaatc
tctttttacgttaataaagtagagaatgatagtatttatttagacttacacttagaggaa
cttccaaaattaaataaagttagaattgtcggtgttaaaaagaacaaaattgaaggactt
atcaaagataatggcttgacggaaaataaagtagtcaacgaaaacttaatcacaactact
aaaaactacattgaaaacaaatacaaaaaagacggttttttcaatactaaagtaaatgta
aataccgttcaagatacctcgacagtaaatcaggtcaatatgttagtttccattgataaa
ggaactaaagtcaaaattgataaaattgactttataggaaactctaaactctctgacaag
gcgcttaaaaaagccatgaaagatactaaacaaaagaagtttacacgaatttttaaagct
tctaaatttataaaagacaagtacaaaacagacttagaaaaagttattgatgtctacaaa
gaaaaaggattcagagatgcgcgtataatttctgatactgtctcttacaacaaagaaaaa
aatgcacttgctgttggaattaaagtagaggaaggaaatcgttattattttggagatatt
aagtttttaggaaatactgtgtattctgaccaaggcttgagcaaagcgctaggactaaga
aaaggagatgtttataacggggtgttacttgaaaaaagaattgcagataaaactaaacct
gacggagaagatataactaatttatatcaaaataacggttacttattttctagtattaac
gctgtagaggttaaaacagctaatgataccattgattttgaaatcagagtaacagaagga
cctattgcctattttaataaaataacagttgttggaaatgacaaaacaaatgatcaagtt
atttatcgtgaattacgaactaaaccaggtgaaaaatacagtaaagaacagcttgttaga
acaattcgagaaataggtcaacttggtttctttgatcctgaaaccatagatcctaagttt
aaaaatgttgattcaggagcaggaacagtagatattgaatacaatctagccgaaaaaggc
gctagtcaaattgaactccaaggaggttatggaggcggtggattcattggaacacttggt
ttgtcctttaataacttttcagcaaagaatatgtttaataagtccgcttaccgacctctt
cctatgggagacggacaaaaggtatcgctaagactacaagcaagtactttctttagaact
tatagcgcttctttttcagagccttggtttggtggaaaaaaaccagttcaattcaattct
tcgatttcgtatagccaacaatacttgaataattttataacctttgaagtagacagaaca
aaaagctttaacattcttacactttctgttggaattgcaaaaaggttaaccgtacctgat
gacttttttgtactatcacagtctgtaagttaccaacactatgaattgaacaattacaat
actggactatttacttttggcgatggaacttctagaaatttagcctatacaataggaata
actagaaataacaaaggggtaaatccaatctttccaacttatggttcagaatttagtttc
tctgctaaatttacacctccctattctttatttgataatgttaactatgccactattggt
tctcaagaagaatataaatttaagtatactggatcaccttatacaggacctaatggaatt
ttagttaatgaaggagactatttagaaagtttaccaagctcaacaaatccattcccaaat
agagtagcaagatttcaagatggagcagctgatccttcaaaagtagatcaacaaaaattt
aactggttagagtactataaagttaaatttaaagcagattggtatactaaactatttgga
aaactcgttatgagaagtttatcagaatttggatttttaggggcttataatcagagtaga
ggatctattccatttgaacgttttttccttggaggagatggaatgcaaatgtttgccatg
gatggtcgtgaaacgattcagctgagaggttatccaaacaactcaattacgccaattaat
agtaatggagaacaattaggtgcaactatctataataaattttcattagaaatgagatat
ccgattacattgaaagcttcagcttcaatttatgccttagcctttttagaagcaggatct
tcttatgattcgtttagaaattacaatccttttgctttaaaccgttcagcaggagtcgga
ttaagagtatttatgcctgcctttggtctacttggtattgactttgcaaaaggttttgat
gcattgccaggacaaagcgcgccaaatggatgggaaacccactttattattggtcaacaa
ttttaa
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