Flavobacterium ammonificans: SHINM13_03320
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Entry
SHINM13_03320 CDS
T08737
Symbol
truB
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
fao
Flavobacterium ammonificans
Brite
KEGG Orthology (KO) [BR:
fao00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
fao03016
]
SHINM13_03320 (truB)
Enzymes [BR:
fao01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
SHINM13_03320 (truB)
Transfer RNA biogenesis [BR:
fao03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
SHINM13_03320 (truB)
Prokaryotic type
SHINM13_03320 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
Motif
Other DBs
NCBI-ProteinID:
BDB56036
LinkDB
All DBs
Position
384284..384991
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AA seq
235 aa
AA seq
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MKTAEEVLNGQVILVDKPLTWSSFQAVNKLKYILKRRFDLPKKFKIGHAGTLDPLASGLL
IICTGKFTKKITEIQAQAKEYTGTFFIGATTPSYDLETEIDQTYPSSHIDEILIHKTVEQ
FLGEIDQKPPVFSAIKKEGVRLYEHARAGVEVEIASRKTTIYEFEITRIALPEIDFRVVC
SKGTYIRSLAFDFGKAMQSGSHLTALRRTKIGNYDVQNALTPEEFEKKYELKSTE
NT seq
708 nt
NT seq
+upstream
nt +downstream
nt
ttgaaaacagctgaagaagtactaaacggtcaagttatactagttgacaaacctttaact
tggtcttcttttcaggcggtaaacaaattgaaatacattttaaagcgacgttttgattta
cccaaaaaattcaaaattggacatgccggaaccttagatcctttggcttcgggtttattg
attatttgcacaggaaaattcaccaaaaaaatcactgaaatccaggcacaagctaaagaa
tatacgggtacttttttcataggagccacaacgccttcctatgatttagaaaccgaaatt
gatcaaacctaccctagttctcatattgatgaaattcttattcataaaacggtagaacaa
tttttaggcgaaattgaccaaaaaccacctgttttttcagcaattaaaaaagagggggtt
cgcctctacgaacatgcaagagcgggtgttgaagtagaaattgcttcgagaaaaacgacg
atttacgaatttgaaattacccgaattgcattacctgaaattgattttagagtcgtttgc
agcaaaggaacttatatccgttcgctagcctttgattttggaaaagcaatgcaatctgga
tcgcatttaacggctttacgaagaacaaaaattggcaactacgatgtccaaaatgcatta
acccctgaggagtttgagaaaaaatatgagttaaaatccactgaataa
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