Flavobacterium ammonificans: SHINM13_04170
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Entry
SHINM13_04170 CDS
T08737
Symbol
rnc
Name
(GenBank) ribonuclease 3
KO
K03685
ribonuclease III [EC:
3.1.26.3
]
Organism
fao
Flavobacterium ammonificans
Brite
KEGG Orthology (KO) [BR:
fao00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
SHINM13_04170 (rnc)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
fao03019
]
SHINM13_04170 (rnc)
03009 Ribosome biogenesis [BR:
fao03009
]
SHINM13_04170 (rnc)
03036 Chromosome and associated proteins [BR:
fao03036
]
SHINM13_04170 (rnc)
Enzymes [BR:
fao01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.3 ribonuclease III
SHINM13_04170 (rnc)
Messenger RNA biogenesis [BR:
fao03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
SHINM13_04170 (rnc)
Ribosome biogenesis [BR:
fao03009
]
Eukaryotic type
90S particles
RNase
SHINM13_04170 (rnc)
Prokaryotic type
rRNA processing factors
SHINM13_04170 (rnc)
Chromosome and associated proteins [BR:
fao03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Microprocessor complex
SHINM13_04170 (rnc)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ribonucleas_3_3
Ribonuclease_3
dsrm
DSRM_2
RM44_endonuclase
Motif
Other DBs
NCBI-ProteinID:
BDB56121
LinkDB
All DBs
Position
483539..484279
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AA seq
246 aa
AA seq
DB search
MRIIKKIFRKSRSLEDGIFFGAIEQILGFPPINLEFYKKAFTHRSSNIIDTTGNPSNYER
LEFLGDAMLSAVIAAYLFDKAPTGDEGYLTKMRSKIVSRDHLNELGKDLNLVQFVESKVP
VQHFGDNIHGNIFESLVGAIYLDRGYEYCEKFIQKRVVVPYVDITRLEGKVISYKSLVIE
WCQKEKKQFHFDIFEDNGIDGERLFGVKLSIDEKVVGKARATSKKKAEEKASQRAYFAFQ
EKIDKK
NT seq
741 nt
NT seq
+upstream
nt +downstream
nt
atgcgtattattaaaaaaatatttagaaaatcccgttctcttgaagacgggatttttttt
ggtgctattgaacaaattttaggtttccctcccataaatctcgagttttataaaaaagca
tttacccatcgctcctctaacattattgacactactggaaatccaagcaactacgaacgg
ttagaattcttaggagacgccatgttaagtgccgttatagccgcttaccttttcgacaaa
gctcctactggtgacgaaggctatttaactaaaatgcgttctaaaattgtaagtagagac
catctcaatgaattgggcaaggacctaaatctagttcaatttgtagaaagcaaagtccct
gttcaacattttggtgacaacattcatggtaatattttcgaatctttagtaggcgccatc
tatttagaccgtggctatgaatactgcgaaaagttcattcaaaaaagagtagtagttcct
tatgtcgatataacccgattagaaggcaaagtcattagttacaaaagtttagtaattgaa
tggtgccaaaaagaaaagaagcaattccattttgatatttttgaagacaatggcattgac
ggcgaacgactttttggtgttaaattaagcattgacgaaaaagtagttggaaaagcccga
gccacttcaaaaaagaaagcagaagaaaaagcatcccaaagagcttattttgcatttcaa
gaaaaaatagacaaaaaataa
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