Flavobacterium ammonificans: SHINM13_04360
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Entry
SHINM13_04360 CDS
T08737
Symbol
xth
Name
(GenBank) exodeoxyribonuclease III
KO
K01142
exodeoxyribonuclease III [EC:
3.1.11.2
]
Organism
fao
Flavobacterium ammonificans
Pathway
fao03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
fao00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
SHINM13_04360 (xth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
fao03400
]
SHINM13_04360 (xth)
Enzymes [BR:
fao01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
SHINM13_04360 (xth)
DNA repair and recombination proteins [BR:
fao03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
SHINM13_04360 (xth)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Exo_endo_phos
Exo_endo_phos_2
DUF2603
DUF4504
Motif
Other DBs
NCBI-ProteinID:
BDB56140
LinkDB
All DBs
Position
complement(507836..508600)
Genome browser
AA seq
254 aa
AA seq
DB search
MKIISYNVNGIRAAISKGLLEWLQQANPDVICFQEIKAQADQVPTLDIELAGYPYHYWFP
ATKKGYSGVAILSKIKPNNIVFGTGIEHMDFEGRNIRVDFDDVSVMSLYLPSGTNAERLD
HKFMYMDDFQNYINEIKKDVPNLVICGDYNICHEAIDIHDPIRNKNVSGFLPAERTWLDN
FLKSGFIDSFRFLNKEPDNYTWWTMRFPTARLNNKGWRIDYCLVSEPLKNRIKRALILPE
AKHSDHCPIMVEIE
NT seq
765 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatcatctcctataatgtcaacggaattcgcgcagcaatttctaaaggactactc
gaatggttgcaacaagccaatccagacgtcatttgtttccaagaaattaaagcacaagct
gatcaagtgccaactttagacattgaattagcaggttacccttatcattattggtttcca
gctaccaaaaaagggtacagtggagtggccattttatctaaaataaaacccaataacatt
gttttcggtaccggaatcgagcatatggattttgaaggacgtaacatccgtgtggacttt
gatgatgtctcggtgatgagtttgtaccttccgtctggaactaatgcagagcgattggac
cacaagttcatgtacatggatgattttcaaaactacattaatgaaataaagaaggatgtt
cctaatttagtgatttgtggcgattataatatttgccatgaggccattgatattcatgat
cctatacgcaataaaaatgtatctggatttttgcctgctgaacgaacgtggttagacaat
ttcttgaaaagcggcttcatcgatagttttcgttttttaaataaagaaccggataattat
acctggtggaccatgcgttttccaacagctagattgaataacaaaggatggcgtattgat
tattgtttggttagcgaaccattaaaaaatagaatcaaacgcgctttgattttaccagaa
gccaaacattcggatcattgtccgattatggtagaaattgagtag
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