Flavobacterium ammonificans: SHINM13_07470
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Entry
SHINM13_07470 CDS
T08737
Symbol
phrB2
Name
(GenBank) FAD-binding protein
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
fao
Flavobacterium ammonificans
Brite
KEGG Orthology (KO) [BR:
fao00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
fao03400
]
SHINM13_07470 (phrB2)
Enzymes [BR:
fao01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
SHINM13_07470 (phrB2)
DNA repair and recombination proteins [BR:
fao03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
SHINM13_07470 (phrB2)
Prokaryotic type
SHINM13_07470 (phrB2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Motif
Other DBs
NCBI-ProteinID:
BDB56451
LinkDB
All DBs
Position
909596..910975
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AA seq
459 aa
AA seq
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MSYPDSDVRHWRFIYESIQDLNKKLAPSKAKIYFFHDEVKTVFSKLIQKYEVKSVFSHQE
IGNKLTYDRDLEMKAFFDDNDIIWKEFQMHGVIRKLKSRQDWDKRWEQVMRDTPKIINES
DLKTIALDSEFYDKIKGADLSTEITTPNPNFQRGGEYWAWRYLDSFVKERYVNYSKHISK
PALSRKGCSRLSPYLTYGNISMRMIYQYTNQHYESSKNKRAILNFVSRLHWHCHFIQKFE
DECEMEFENANRAYDSLVKPKNETYIKAWQEGKTGVPIVDACMRCLVATGYINFRMRAMV
VSFFTFNLWQDWRELHFLARQFLDYEPGIHYPQIQMQSGTTGINTIRIYSPIKNSEEHDP
DGIFIKQWLPELAEVPVHLLHEPWKMNEMEQQFYNCIIGTDYPAPIVDIEATRKYASDIV
WSFRKKDEVKQEGKRILQKHVSNPNKPKNARSKKTKPTN
NT seq
1380 nt
NT seq
+upstream
nt +downstream
nt
atgagttatcccgattcggatgttcgccattggcgattcatttacgaatctattcaggat
ttgaataaaaaattagcgccgtcgaaagcaaaaatctatttttttcatgacgaagtcaaa
actgttttttccaaattaattcaaaaatatgaagtaaaatctgttttctcccatcaagaa
atcggaaataagttaacctacgaccgcgatttggaaatgaaagcgtttttcgatgacaat
gacatcatttggaaagagtttcagatgcacggtgtcattcgtaaattaaaatcaagacaa
gattgggacaagcgctgggaacaagtcatgcgtgataccccaaaaattataaatgaatcc
gatttaaaaacgatagcattagattcggagttttatgacaaaataaaaggcgcggattta
tcaactgaaatcactactccaaatcctaactttcaacgtggaggcgaatattgggcctgg
cgttatttggatagttttgttaaagaacggtatgtcaattacagcaaacacatttcaaaa
ccggccttgagtagaaaaggctgcagtcgcttgtcgccttatttaacgtatggaaacatt
agtatgcggatgatttatcagtatacgaatcagcattacgagtcatctaaaaataaacga
gcgattctcaattttgtttcgcgcttgcattggcattgccatttcattcaaaagtttgaa
gacgaatgcgaaatggaatttgaaaacgccaaccgtgcctatgattctttggtaaaacca
aaaaacgagacctacatcaaagcttggcaagaaggaaaaacgggtgtgccaattgtcgat
gcctgtatgagatgtttggtagcaacgggctatattaattttagaatgcgcgccatggta
gtgtcatttttcacttttaatttatggcaagattggcgtgaattgcatttcttggcaagg
cagtttttagattacgaacctggaattcattatccgcaaattcaaatgcaatctgggacc
acgggaattaatacgatacgaatttacagtccgattaaaaattctgaagagcatgatcct
gatggaattttcattaaacaatggctccccgaattagctgaagtacccgtgcatttgctt
cacgaaccttggaaaatgaacgaaatggagcagcaattttataattgcattattggcaca
gattatccagctcctattgttgatattgaagcaactcgaaagtatgccagcgatatcgtt
tggagctttcgcaaaaaagatgaagtgaaacaagaaggaaaacgaattttgcaaaaacac
gtgagtaaccccaataaaccaaaaaatgcgaggagtaaaaaaacaaaacctaccaactaa
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