Flavobacterium ammonificans: SHINM13_07760
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Entry
SHINM13_07760 CDS
T08737
Symbol
aspS
Name
(GenBank) aspartate--tRNA ligase
KO
K01876
aspartyl-tRNA synthetase [EC:
6.1.1.12
]
Organism
fao
Flavobacterium ammonificans
Pathway
fao00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
fao00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
SHINM13_07760 (aspS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
fao01007
]
SHINM13_07760 (aspS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
fao03016
]
SHINM13_07760 (aspS)
03029 Mitochondrial biogenesis [BR:
fao03029
]
SHINM13_07760 (aspS)
Enzymes [BR:
fao01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.12 aspartate---tRNA ligase
SHINM13_07760 (aspS)
Amino acid related enzymes [BR:
fao01007
]
Aminoacyl-tRNA synthetase
Class II (A)
SHINM13_07760 (aspS)
Transfer RNA biogenesis [BR:
fao03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
SHINM13_07760 (aspS)
Prokaryotic type
Other AARSs
SHINM13_07760 (aspS)
Mitochondrial biogenesis [BR:
fao03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Other mitochondrial DNA transcription and translation factors
SHINM13_07760 (aspS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2
tRNA_anti-codon
GAD
tRNA-synt_2d
DUF6478
Motif
Other DBs
NCBI-ProteinID:
BDB56480
LinkDB
All DBs
Position
complement(941973..943727)
Genome browser
AA seq
584 aa
AA seq
DB search
MYRSHNCGELNASHINTEVTLAGWVQKSRDKGFMNWVDLRDRYGITQLIFDESRTEKSVF
ELAKTLGREFVIQVKGTVIERESKNAAMTTGEIEILVSEMTILNAALTPPFTIEDETDGG
EDIRMKYRYLDIRRNPVKNSLLFRHKVTMEVRKYLSDLDFCEVETPYLIKSTPEGARDFV
VPSRMNEGQFYALPQSPQTFKQLLMVGGMDKYFQIVKCFRDEDLRADRQPEFTQIDCEMA
FVEQEDILNVFEGLTRHLLKEIKGVEVAKFPRITYDYAMKTYGNDKPDIRFGMEFGELNA
VAQHKDFPVFNTAELVVGIAVPGAGNYTRKEIDALIDWVKRPQVGASGMVYVKCNEDGTY
KSSVDKFYDQDDLTQWAKATQAKVGDMIFVLSGPANKTRAQLSALRMELATRLGLRKPDE
FAPLWVVDFPLLELDEESGRYHAMHHPFTSPKPEDINLLATDPGKVRANAYDMVLNGNEI
GGGSIRIHDKATQELMFKYLGFTPEEAKAQFGFLMDAFQFGAPPHGGLAFGLDRLVAILG
GQETIRDFIAFPKNNSGRDVMIDAPSTIDEAQLKELHIQLDLKA
NT seq
1755 nt
NT seq
+upstream
nt +downstream
nt
atgtacagaagtcataactgcggcgaattgaacgcctcacatatcaatacagaagttaca
ctagccggttgggttcaaaaatcacgcgataaaggatttatgaattgggtcgatttacga
gaccgttatggaattacgcaattgatttttgacgaaagtcgcaccgaaaaatcggttttt
gaattggccaaaactcttggacgtgaatttgtaattcaagtaaaagggactgtaattgag
cgtgagtctaaaaatgctgcaatgactacaggagaaattgagattttggtttcagaaatg
accatcttgaatgctgccttaaccccacctttcacgattgaagacgaaacagatggtggt
gaagacatccgaatgaaataccgttatttggatattcgaagaaatccagtaaaaaacagt
ttgcttttccgtcataaagtaaccatggaagtacgcaaatacctttctgatttggatttt
tgcgaagtggaaacgccttatttaatcaaatcaactcctgagggagctcgagattttgtg
gtgccttcgcgaatgaacgaaggacaattttatgccttaccacaatcgccacaaaccttc
aaacaattattaatggtgggtggaatggataagtatttccaaattgtgaaatgtttccgt
gacgaagatttacgtgccgacagacaacctgagtttactcaaattgactgcgaaatggcc
tttgtagaacaggaagatattttgaatgtttttgaaggacttactcgtcatttattaaaa
gaaattaaaggcgttgaagtagcaaaattcccaagaattacctacgactacgctatgaaa
acctacggaaatgataagccggacatccgtttcggaatggaatttggcgaattaaatgcc
gtcgcacaacataaagattttccagtttttaataccgctgaattagtagtaggaattgcc
gttccaggcgctggaaattacacccgaaaagagattgatgctttgattgattgggtaaaa
cgtccacaagttggcgcttcgggaatggtgtatgtaaaatgtaacgaagacggaacttac
aaatcatcagtagataaattttacgatcaagacgatttgactcaatgggcaaaagcgaca
caagcaaaagtaggcgatatgatttttgttttgtcaggacctgctaataaaactagggca
caactttcggcattacgtatggaactagctacacgtttaggtttgagaaaaccagacgaa
tttgctccattatgggtagtcgattttccattattagaattagatgaggaaagtggtcgt
taccatgccatgcaccatccgtttacatcgccaaaaccagaagacattaatttacttgca
actgatccaggaaaagttcgtgccaatgcctacgatatggtgttgaacggaaacgaaatt
ggcggaggttctattcgtattcacgataaggcgacacaagaattgatgttcaaatattta
ggattcactcccgaagaagcaaaagcacaatttggtttcttaatggatgccttccaattt
ggcgcaccccctcatggtggattggcctttggattggatcgattagttgctattttaggt
gggcaagaaaccattcgtgattttattgccttcccaaaaaacaattcgggtcgcgatgtg
atgattgatgcaccttcaacgattgatgaagcacaattgaaagaattgcatattcaattg
gatttgaaagcgtaa
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