Flavobacterium ammonificans: SHINM13_08270
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Entry
SHINM13_08270 CDS
T08737
Name
(GenBank) pseudouridylate synthase
KO
K06178
23S rRNA pseudouridine2605 synthase [EC:
5.4.99.22
]
Organism
fao
Flavobacterium ammonificans
Brite
KEGG Orthology (KO) [BR:
fao00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
fao03009
]
SHINM13_08270
Enzymes [BR:
fao01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.22 23S rRNA pseudouridine2605 synthase
SHINM13_08270
Ribosome biogenesis [BR:
fao03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
SHINM13_08270
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
S4_2
Motif
Other DBs
NCBI-ProteinID:
BDB56531
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All DBs
Position
complement(999394..1000218)
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AA seq
274 aa
AA seq
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MQKRAQGPKKAKINTKVAEVEANKVVKKPNQAPKRSKAADEIRLNKYIANSGVCSRRDAD
IYIQSGNVKVNGVPVTEMGYLVKITDTVNFDGVLLTPEKKEYILLNKPKNFTTALDEGQE
FRNVLELVRGATTAKIGAVGRMDKNTTGLLLFTNDTDMIRKFTLPNQKSSKIYQVSLDKN
LKYEDLEKISKGLVLDGHRVFVEEVSYIDNEPKSEIGLKLRSSNVKVVRSIFEHFDYNVL
RIDRVAFAGLTKKNLPRGNWRMLTEQEIINLKNV
NT seq
825 nt
NT seq
+upstream
nt +downstream
nt
atgcaaaagcgtgcgcaaggtcctaaaaaggctaaaatcaataccaaagtagccgaagtg
gaagctaataaagtggttaaaaaaccaaatcaagcgccaaaaagatccaaagcagctgac
gaaattcgtttgaataaatacattgccaattcaggcgtttgttcgcgtcgtgatgcggat
atttacatccaatcaggaaacgtaaaagtaaatggcgttcctgtaactgaaatggggtat
ttagtaaaaattaccgatacagttaattttgacggagtgcttttaactccagagaaaaaa
gaatacatcttgttgaacaaacctaaaaatttcactacagctttagacgaaggtcaagag
tttcgtaatgttttagaattagttcgcggtgcaactacagcaaaaattggagcggtaggt
agaatggacaaaaatacaacgggattgttattgtttactaatgacaccgatatgattaga
aagtttactttacctaatcaaaagtcatcaaaaatataccaagtttccttagataaaaac
ttgaaatacgaagatttagaaaaaattagcaagggtttagttttagatggacaccgagta
tttgttgaagaagtaagttatatcgacaacgaacctaaaagtgaaatcggtctaaaatta
cgttcttcaaatgtaaaggtggtgcgttctatttttgagcactttgattacaatgtattg
cgaattgatcgtgtggcttttgctggtttaaccaaaaagaatttaccacgaggcaattgg
agaatgcttacggaacaagaaattatcaatttgaaaaacgtataa
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