Flavobacterium ammonificans: SHINM13_08800
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Entry
SHINM13_08800 CDS
T08737
Symbol
pbpA
Name
(GenBank) penicillin-binding protein 2
KO
K05515
penicillin-binding protein 2 [EC:
3.4.16.4
]
Organism
fao
Flavobacterium ammonificans
Pathway
fao00550
Peptidoglycan biosynthesis
fao01100
Metabolic pathways
fao01501
beta-Lactam resistance
Brite
KEGG Orthology (KO) [BR:
fao00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
SHINM13_08800 (pbpA)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
SHINM13_08800 (pbpA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
fao01011
]
SHINM13_08800 (pbpA)
Enzymes [BR:
fao01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
SHINM13_08800 (pbpA)
Peptidoglycan biosynthesis and degradation proteins [BR:
fao01011
]
Peptidoglycan biosynthesis and degradation
DD-Transpeptidase (Class B PBP)
SHINM13_08800 (pbpA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Transpeptidase
PBP_dimer
Motif
Other DBs
NCBI-ProteinID:
BDB56584
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All DBs
Position
complement(1064304..1066253)
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AA seq
649 aa
AA seq
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MRKVLLPTLIIIGASLLVLRIFFLQVVDDSFKLKSDNNAIKIKYDYPERGYIFDRKGKLL
VSNQASYDIMVIPREVKKIDTTEFCELLNITKEDFIKKIEKATIYSPRLPSVFLTQLNKI
EFAAFQEKIRKFQGFYFQKRSLRDYEVNYGANIFGFITQVNENLIAKNPYYNSGDLIGEQ
GVEESYEEVLRGIKGVKYIQKDKYNREIGSFKEGKYDTIAVQGSDINLTIDAELQKYGEE
LMINKRGGIVAIEPKTGEILSLITAPSYDPSILVGRQRSKNYTQLYRDSIAKPLYDRGLL
AEYPPGSPFKILTGLVALQEGVINEQTAVACNHGFSYARGRFMRCHCHGGMLQLHRGIYE
SCNAFFGTSYMKTINKYVKPAYAVDVWSKHVKSFGLGQFMGYDLPTGRKGNIPDSKTYKR
IYPNGGWRSTAIVSNAIGQGEVLMTPIQLANMMATVANQGYYYTPHIIKNIKGRKIEKKF
TTKHYTTIDRKYFKPIIDGLFDVYNLGTAYHLKVEGIDICGKTGTAENFAKIGGVRTQLE
DHSIFVAFAPKDNPKIAIAVMVENGGYGATIAGPIASLMIEKYLRNKITRTDLETRILNK
SLQGQYAKLGGLSETVKKEMRKQDSIIKSKTSSPKLKKDTIQSVKKVAR
NT seq
1950 nt
NT seq
+upstream
nt +downstream
nt
atgagaaaagtcttgctacctaccttaattattattggagcttcattattagttttacgt
attttttttctacaagttgtcgatgattcatttaaattgaaatccgataacaatgccatc
aagataaaatatgactatccggagagaggttatatttttgatagaaaaggcaaacttttg
gtttcaaaccaagcttcttatgatattatggtaatcccaagggaggttaaaaaaattgac
acaaccgaattttgtgaacttctcaatatcacaaaagaggattttatcaagaaaatcgag
aaagctacaatatacagcccaagattaccttcggtatttttaactcaacttaacaaaatt
gaatttgctgctttccaagaaaaaattagaaaatttcaaggtttttattttcaaaaacgt
tctcttcgagattatgaagtaaattatggcgcaaatatttttggctttatcacccaggta
aatgaaaacttaattgcaaaaaacccctattataatagcggtgatttaattggcgaacaa
ggggtggaagaaagttatgaggaagttttgcgaggaattaaaggggtaaaatacattcaa
aaagacaaatacaacagagaaataggttctttcaaagaaggaaaatacgacactattgca
gtacaaggaagcgacatcaacttaacaattgatgcagaacttcaaaagtacggcgaagag
ttaatgatcaataaacgcggtggtattgtagcaatcgaacccaaaacaggagaaatatta
tcattaattacagcaccctcctatgatccatccatattagtaggtagacaacgttctaaa
aattatacccagttgtatcgagattccattgccaaaccattatatgatagagggctactt
gcagaatatccgccaggatcaccttttaaaattttaactggtttagttgctttacaagaa
ggcgttattaatgaacagacagctgttgcctgtaatcatggatttagttatgcaagaggt
cgtttcatgagatgtcactgtcatggtggaatgttgcaattacacagaggaatttatgaa
tcttgtaatgcctttttcggaacttcttatatgaaaacaatcaataaatatgtaaaacca
gcttatgcggttgatgtttggagtaaacatgtaaaaagttttggacttggacaatttatg
ggatatgaccttccaactgggagaaaaggcaacattccggattcaaaaacgtataaaaga
atctatccaaatggaggttggcgaagtacagctattgtatctaatgcaattggtcaagga
gaagtgttaatgacacctattcaattagcgaatatgatggcaacagtagcgaatcaaggt
tattattatactcctcacattattaaaaatattaaagggagaaaaatagaaaaaaaattc
acaacgaaacattataccacaattgatagaaaatattttaaaccaattattgatggttta
tttgatgtatataatttaggtacggcctatcatcttaaagtagaaggaatcgatatttgt
ggaaaaactggaactgcggagaattttgctaagattggaggagttagaactcaacttgaa
gatcattcaatatttgttgcctttgcaccaaaagataatccaaaaattgcaatagccgta
atggtagaaaatggtggttatggggcaacaattgccggtccaattgccagtttgatgatt
gaaaaataccttagaaataaaataacaagaactgatctagaaactcgtattctaaataaa
agtttacaaggtcaatatgcaaaactgggcgggctttcggaaactgttaaaaaagaaatg
agaaaacaagactctattataaaaagtaaaacgagtagtcccaaattaaaaaaagacaca
atacaatccgttaaaaaagtggctcgttaa
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