Flavobacterium ammonificans: SHINM13_12960
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Entry
SHINM13_12960 CDS
T08737
Name
(GenBank) isocitrate dehydrogenase, NADP-dependent
KO
K00031
isocitrate dehydrogenase [EC:
1.1.1.42
]
Organism
fao
Flavobacterium ammonificans
Pathway
fao00020
Citrate cycle (TCA cycle)
fao00480
Glutathione metabolism
fao00720
Other carbon fixation pathways
fao01100
Metabolic pathways
fao01110
Biosynthesis of secondary metabolites
fao01120
Microbial metabolism in diverse environments
fao01200
Carbon metabolism
fao01210
2-Oxocarboxylic acid metabolism
fao01230
Biosynthesis of amino acids
fao04146
Peroxisome
Module
fao_M00010
Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate
Brite
KEGG Orthology (KO) [BR:
fao00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
SHINM13_12960
09102 Energy metabolism
00720 Other carbon fixation pathways
SHINM13_12960
09106 Metabolism of other amino acids
00480 Glutathione metabolism
SHINM13_12960
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
SHINM13_12960
Enzymes [BR:
fao01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.42 isocitrate dehydrogenase (NADP+)
SHINM13_12960
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GFIT
Motif
Pfam:
IDH
HyaE
IFN-gamma
PDZ_CPAF_rel
DUF1843
Motif
Other DBs
NCBI-ProteinID:
BDB57000
LinkDB
All DBs
Position
complement(1503452..1505674)
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AA seq
740 aa
AA seq
DB search
MAQKSKIFYTLTDEAPLLATYSFLPIVQAFTGTSDIEIETRDISLAGRILANFSEYLTDS
QKTGDALAELGQLATTPEANIIKLPNVSASVPQLKAAIAELQSHGYALPSFPEDPQNEEE
KNVKAKYAKILGSAVNPVLREGNSDRRAPKAVKNYAKANPHSMGAWSPTSKTYVASMESG
DFYGSEQSVTIAEATDVKIEFVAKDGTTTVLKASTPLKAGEIIDSSVMNVNALKSFVNKT
INEAKEQGLLLSVHLKATMMKVSDPIIFGAIVEVYFKDVFEKYAALFAELNIDTRNGLGD
VYAKIAGHAKQAEVETAINNAIANGPAIAMVNSEKGITNLHVPSDVIVDASMPAMIRTSG
QMWNAAGKQQDTVAIIPDRCYAGVYTATIDFCKQNGAFDPTTMGSVPNVGLMAQKAEEYG
SHDKTFQMQADGVVRVVDTNGNVLMEQAVEAKDIFRMCQAKDAPIQDWVKLAVNRARLSS
TPAIFWLDENRAHDRELIVKVQKYLKDHDTTGLDIQILSPIAATKATLERIIKGLDTISV
TGNVLRDYLTDLFPILEVGTSAKMLSIVPLMNGGGLFETGAGGSAPKHVEQFTEESYLRW
DSLGEFLALGASLEHLSQTLNNPKAMVLAETLDVATEKFLANDKSPARKVGQIDNRGSHF
YLTMYWAEALAAQDKDAELKATFTPVAKAFIDNEATINLELIGAQGKSQNIGGYYQPNPD
LTSKAMRPSATFNAILATIK
NT seq
2223 nt
NT seq
+upstream
nt +downstream
nt
atggcacagaaatccaaaattttttacacgcttacagatgaagcccctttgttagcaact
tattcttttttacctatcgttcaagccttcactggcacctctgacattgaaattgaaaca
agagatatttcattggctggaaggattttagctaatttctcagagtatttgacagatagt
cagaaaacaggagatgcattagcagaattaggtcagttagcaacaactcctgaagcgaat
attataaaactacctaacgtttctgcttctgtgccgcaattaaaagctgctattgctgaa
ctgcaatctcatggatatgcattacctagctttccagaagatcctcagaatgaggaagaa
aaaaacgtaaaagcaaaatacgctaaaatattaggatcagctgtaaatccagttttacgt
gaaggcaactcagatcgtagagcgccaaaagcagtaaaaaattacgccaaagccaatcca
cattctatgggagcttggtcgccaacatcaaaaacctacgttgcctcaatggaatcgggt
gatttttacggaagtgaacaatcggttaccattgctgaagcaaccgatgtaaaaatagaa
tttgtagctaaagacggaacaactaccgttttaaaagctagtactccattaaaagctggc
gaaattatcgattcgtcagtaatgaatgtaaacgctttaaaatcttttgtaaacaaaaca
ataaacgaagccaaagaacaagggctattactttcagttcacttgaaagcaactatgatg
aaagtttctgacccaatcatttttggtgctattgttgaagtgtatttcaaagatgttttt
gaaaaatatgccgctttatttgctgaattaaatatcgataccagaaatggtcttggggat
gtttatgctaaaattgctggtcatgcgaaacaagctgaagtagaaactgcaatcaataat
gctattgcaaatggccctgctattgctatggtaaattctgaaaaaggaatcacaaatctt
catgttccatcggatgtaattgtagatgcttcaatgccagctatgattcgtacttcaggc
caaatgtggaacgcagcaggcaaacaacaagatactgtagccattattccagaccgttgt
tatgctggtgtatacactgctacaattgatttttgtaaacaaaatggtgcttttgatcct
acaactatgggaagtgttccgaacgtaggtttaatggctcaaaaagcagaagaatatggt
tctcatgataaaacattccaaatgcaagcagatggggtggttcgtgttgtagatactaat
ggaaatgttttgatggaacaagctgttgaagcgaaagatatttttagaatgtgtcaagca
aaagatgctccaattcaagactgggttaaactagctgtaaatagagcgcgtttgtcaagc
acaccagctatattctggctagatgaaaatagagctcacgatagagaattgattgtaaaa
gttcaaaaatatttgaaagaccacgatacaactggtttagatattcaaatactttctcca
atcgcagctactaaagcaactttggaaagaatcattaaaggactagatactatctctgtt
actggaaacgtattacgtgattacttaactgatttgtttccaattttagaagtgggaact
tcagctaaaatgttatctattgttcctttgatgaatggtggaggcttatttgaaacaggt
gctggtggatcagctccaaaacacgtggagcaatttactgaagaaagttatttacgttgg
gattcacttggtgagtttttagctttaggtgcttctttagaacatttgagccaaacatta
aacaatcctaaagctatggttttagctgaaacattagacgttgcaactgaaaaattctta
gcgaatgataaatctccagcgcgtaaagtaggtcaaattgacaaccgtggttctcatttc
tacttaacaatgtattgggcagaagcattagcagcacaagataaagacgcagaattaaaa
gcaacttttactcctgttgcgaaagcatttattgataatgaagctactattaatttagaa
ttaattggcgcgcaaggaaaatcacaaaatattggtggatattaccaaccaaatccagat
ttaacatcaaaggctatgcgaccaagcgctacttttaatgcaattctagccacaataaag
taa
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