Flavobacterium ammonificans: SHINM13_13020
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Entry
SHINM13_13020 CDS
T08737
Name
(GenBank) ABC transporter
KO
K18889
ATP-binding cassette, subfamily B, multidrug efflux pump
Organism
fao
Flavobacterium ammonificans
Pathway
fao02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
fao00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
SHINM13_13020
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
fao02000
]
SHINM13_13020
Transporters [BR:
fao02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
SHINM13_13020
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC_membrane
SMC_N
DUF87
AAA_29
nSTAND3
RsgA_GTPase
AAA_18
ATP-synt_ab
Motif
Other DBs
NCBI-ProteinID:
BDB57006
LinkDB
All DBs
Position
complement(1510486..1512264)
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AA seq
592 aa
AA seq
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MRELSYLNKYFVKYKFSFLLGIVITIVAQIFSLFTPKLISQSLEAIEKFDRLSIQEKSSE
SVLSHFKSDLVDNILLIIGTTIIAGFLTFLMRQTLIVMSRHIEFDLKNEVFRQYENLSQQ
FYKQNRTGDLMNRISEDVSKVRMYVGPAVMYTINTFIRFAIVIAYMYNVSPRLTLYTILP
LPILSYTIFKLSTEINKRSTVFQQYLSKVSSFSQEIFSGIRVIKAYSLENQHQDNMIALA
NESKSKSLDLARVQSLFGPLMLALIGISNLVVIYFGGLMYMDGTIKSIGTIAEFILYVNM
LTWPVASLGWVSSMVQEAEASQKRLNEFLKIEPEIKNTNPNRSSIEGSIVFNNVSFTYED
TNINAIQNISFTVNKGETLAILGKTGSGKSTILSLISRLYDVNEGEINIDNRPIHTLNLF
DLRNSIGIVPQDAFLFSDSIKNNIKFGKEDATDEEIELAAKNAVVHDNIMGFNKKYDTVL
GERGITLSGGQKQRVSIARAIIKNPPILLFDDCLSAVDTETEETILNNLYEICKDKTTII
VSHRVSSAKNADQIIIIDEGKIIQQGSHNQLLNEKGYYADLYLKQLSEKELT
NT seq
1779 nt
NT seq
+upstream
nt +downstream
nt
atgagagaattaagttatttaaataagtacttcgtcaaatacaaattcagttttttacta
ggaatagtaattaccattgtagcacaaatcttttctttgttcacaccaaaactgattagt
caatcattagaagccattgagaaatttgatcgcttatccattcaagaaaaatcctctgaa
tctgttctatcgcatttcaaaagcgatttggttgacaatatactacttatcattggaacc
actattattgccggatttttgacctttttaatgcgacaaacattaatcgtaatgtcacgt
catattgaatttgatctgaaaaatgaagtctttagacaatatgaaaacctttcccaacaa
ttctacaaacaaaatagaaccggtgatttaatgaaccgaattagtgaggacgtttccaaa
gtcagaatgtatgttggtcccgccgtaatgtacactatcaacacttttattcgctttgca
attgttattgcttatatgtacaatgtatcgccaagattgactttatatactattttaccc
ttacctattttatcttatacaatttttaaattaagtactgaaatcaacaaacgtagtacc
gtattccaacaatatttatcgaaagtctctagtttttctcaagaaattttttctggaatt
cgagttatcaaagcctattccttagaaaatcagcatcaagataatatgattgctttagcc
aatgaaagtaaaagcaaaagcttggacttggcacgagtacaatctttgtttgggccgtta
atgttagcgttaattggtattagtaaccttgtagtgatttattttggcggactgatgtac
atggacggaaccattaagagtattggtaccattgcagaatttatcttatatgtaaatatg
ttgacatggccggtggcttctttaggttgggtttcttctatggtgcaggaggcagaagcg
tctcaaaaacgtttgaatgaatttttaaaaatcgaacctgaaattaaaaatacaaatcca
aatcgttcatctattgaaggaagcattgtgtttaataacgtaagttttacctatgaagat
accaatatcaatgccattcaaaacatttcgtttactgtaaataaaggagagactttagct
attttaggaaagactggttcaggaaaatcaactattttatctttaatttccagattatat
gatgttaacgaaggtgaaattaatattgacaacagaccaattcacacccttaacttattt
gatttacgaaatagtatcggaattgttccacaagatgcttttttgttttcagacagtata
aaaaacaacattaaatttggtaaagaagatgccaccgatgaagaaattgagttagcagct
aaaaatgcggttgttcatgacaacatcatgggattcaataaaaaatacgatacggtttta
ggcgaaagaggaattacactatctggaggacaaaaacaacgtgtgtcaatagctagagct
attattaaaaatccgcctatcttactttttgacgattgtttatctgcagttgacaccgaa
acggaagaaaccattttaaacaatttgtacgaaatttgtaaagataaaactaccatcatc
gtcagtcatcgtgtttcctctgcaaaaaatgcagaccaaattattattatcgatgaagga
aaaatcattcaacaaggttctcataatcaattactaaatgagaaagggtactatgccgac
ttgtatttgaaacaattatcggaaaaagaattaacataa
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