Flavobacterium ammonificans: SHINM13_15000
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Entry
SHINM13_15000 CDS
T08737
Name
(GenBank) hypothetical protein
KO
K07091
lipopolysaccharide export system permease protein
Organism
fao
Flavobacterium ammonificans
Pathway
fao02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
fao00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
SHINM13_15000
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
fao02000
]
SHINM13_15000
Transporters [BR:
fao02000
]
ABC transporters, prokaryotic type
ABC-2 type and other transporters
Lipopolysaccharide transporter
SHINM13_15000
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LptF_LptG
Fibroin_P25
Motif
Other DBs
NCBI-ProteinID:
BDB57204
LinkDB
All DBs
Position
complement(1732482..1733696)
Genome browser
AA seq
404 aa
AA seq
DB search
MSFGDLSENYELAAMKSAGISLRRTLQPLFYLITIFSIAAFIFANSVIPYAEYKFINFRK
NIAQSKPALAIAEGQFSDVGIYNIKVNKKSGENGENLTGITIHKKSDVGDGSRIIIKAKK
GKLVSSEGSNTLQMILNDGNYYEDILPKNYEDRPKMPFVKSAFKKNIITIDISEFNKIDV
DKENITNTNSMLTTSELQYTIDSLQKNYKVDVTAFTENMNQRVGLQKSTQAAVKIKKTKK
KFNPNLLDYFNTKQQLDILNLSHSNLESVKYSIESSATEFKLKEVNINGHLSSLNDKFVI
AFACFLMFFIGAPLGAIIRKGGLGLPVVFAMLIFISFHFANTFGKKLAEEGGLTPFLGAW
MSSLVLTPLAILLTYRATNDIGLINMDVILAPIQQFIKKIVPQK
NT seq
1215 nt
NT seq
+upstream
nt +downstream
nt
atgtcttttggcgatttatcagaaaactatgagttggcggcaatgaaatcggcaggaata
tcgttacgacgtactttacagcccttgttctatttgatcactatttttagcattgcagct
tttatttttgccaatagtgtcattccatatgccgaatacaaattcatcaattttagaaaa
aatattgcgcaatctaaaccagcattggcaattgctgaaggccaatttagcgatgtagga
atttacaatattaaagtgaataaaaaatcaggcgaaaacggtgaaaatctaacaggcatt
actattcataaaaaatcagatgtgggcgatggcagccgcattattatcaaagccaaaaaa
ggaaagttagtcagtagcgaaggttcgaacacccttcaaatgatattgaacgacggtaat
tattatgaagatattttaccaaaaaactacgaggaccgtcctaaaatgccttttgtaaaa
tcggcctttaaaaagaacatcattaccattgatatttcggagttcaataaaattgatgtg
gacaaagaaaacattaccaacaccaattcgatgttgaccacaagtgaattgcagtacact
atagattccttacaaaagaattataaagtagatgttacagcttttacagaaaatatgaat
cagcgtgttggacttcaaaaatcgacacaagctgcggtaaaaatcaaaaaaacaaagaaa
aaattcaatcctaacttgttggattatttcaataccaaacagcaattggatattttaaat
ttatcccatagcaatttagaaagtgtgaaatattcgatagaaagctctgccacggaattc
aaattaaaagaagtcaatatcaacgggcatttaagttcgcttaacgataagtttgtcatt
gcctttgcttgctttctgatgttctttattggagcacccttaggcgccatcattcgaaaa
ggcggattgggattaccggtggtttttgctatgcttattttcatttcgttccattttgcc
aatacctttggtaaaaaactagctgaagaaggcggattaaccccatttttaggcgcttgg
atgtcctcattagtgttgacaccgctggccattttattaacctatcgtgcgaccaatgat
atcggtttaatcaatatggatgtcatcttggctcccattcaacaatttattaaaaaaata
gttccccaaaaataa
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