Flavobacterium ammonificans: SHINM13_16550
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Entry
SHINM13_16550 CDS
T08737
Name
(GenBank) endonuclease MutS2
KO
K07456
DNA mismatch repair protein MutS2
Organism
fao
Flavobacterium ammonificans
Pathway
fao03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
fao00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
SHINM13_16550
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
fao03400
]
SHINM13_16550
DNA repair and recombination proteins [BR:
fao03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
SHINM13_16550
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutS_V
AAA_22
Motif
Other DBs
NCBI-ProteinID:
BDB57359
LinkDB
All DBs
Position
complement(1907324..1909489)
Genome browser
AA seq
721 aa
AA seq
DB search
MISITEKTLQDLQFPTVLETLSAICNTDIGKQKALEITPFKDKESLMEALLQTSEYVSSF
QNNNAIPNHGFDAITHEIKFLAIEDSFLEVGSFRKIANLSSTVNFLLNFLRKFHDYYPNL
NNRASKVELTKDIITMVDEVVDKYGEIKDNASPDLLNIRRDMNVVRGKVNQSFGVALTQY
NSLGYLDDIRESFVQNRRVLAVLAMYRRKVKGSILGSSKTGSIAYIEPETTLKYSRELSN
LEYEEKEEINRILKQLSNRIRPFLDLLIEYQNFLSDVDVIAAKAKYANKINAILPTITEE
RRLFFRDAFHPILFLSNKEKNEITYPQTIELEQENRIIVISGPNAGGKTISLKTVGLLQL
MLQSGMLIPVHERSETFLFDRILTDIGDNQSIENHLSTYSYRLKNMNYFLKKCNKKTMFL
IDEFGTGSDPELGGALAEIFLEEFYHREAFGIITTHYSNLKILANELPFATNANMLFDEK
SLEPMYKLVLGQAGSSFTFEVAQKNGIPYGLINRAKKKIEVGKVRFDKTIATLQKERSKL
EKTSLTLKEEETKAREESKKMETINVKIKQKLESYQELYDSNQKTIYIGQKIEDIADKYF
NNKNKKELIGEFLKIVEIENSKRKKASAKDTKVIAEKKKEVIKEVAVQVEEIRAEKKAKK
VKVVVEKPRPILKVGDRVRMFDGKAVGSIDAIERNKATVNYGLFTSKVGLELLELVEAIK
K
NT seq
2166 nt
NT seq
+upstream
nt +downstream
nt
atgatatccatcaccgaaaagactttacaagatttacaattcccaacagttttagaaacg
ttgtctgctatttgtaataccgatattggaaaacaaaaagcacttgaaattacacctttt
aaagacaaggaaagcttgatggaagctttgttacaaacctcagaatatgtgtcgtctttt
caaaacaataatgctattcccaatcatggatttgatgccataactcacgaaattaaattt
ttagctattgaggatagctttttggaagtcggaagttttagaaaaattgccaacttatcc
agtaccgttaatttcttattgaatttcttgagaaaattccatgattattatcccaactta
aacaatagagcttctaaagtagaattgacgaaagacatcatcacaatggtggatgaagta
gttgataaatatggtgaaatcaaagataatgcttcacctgatttattgaatatccgacgt
gatatgaatgtggttcgaggcaaagtcaatcaaagttttggtgtggctttaacgcaatac
aattcattaggttatttagatgatataagagaaagttttgttcaaaatcgtcgtgttttg
gctgttttagcaatgtatcgtcgtaaagttaaaggatcaattttagggagttccaaaacg
ggaagtattgcttatatcgaacccgaaactacattaaaatattcgcgtgaattaagtaat
ttagaatacgaagaaaaggaagaaatcaaccgaattttaaaacaattatcgaatagaatt
cgtccttttttagatttattgattgaataccagaactttttaagcgatgttgatgtaatt
gctgccaaagcaaaatatgccaataaaatcaatgctattttaccaaccattacagaagaa
agacgtttgttttttagagatgccttccatccaattttatttttatccaataaagagaaa
aacgaaattacctatccacaaactatcgaattagaacaagaaaatagaatcattgttatt
tcgggtccaaatgcgggtggaaaaaccatttcgctaaaaacagtaggattactccaatta
atgttgcaatccggaatgttgattcccgttcacgagcgcagtgaaacctttttatttgat
agaattctgacagacattggcgacaaccaatcgatagaaaatcatttgagtacgtatagc
tatcgcttaaagaatatgaactatttcttgaaaaagtgcaacaagaaaacgatgtttttg
atcgatgaatttggaacgggttctgatcccgaattaggtggtgcattggcagaaattttc
ttagaagaattctaccatcgtgaggctttcggaatcattacaactcactattcgaactta
aagattctggctaatgaattgccttttgctaccaatgccaacatgctttttgatgaaaaa
tcgttagaaccgatgtataaattggttttaggtcaagccggtagttcgtttacttttgag
gtggctcaaaaaaatggtattccttatggtttaataaaccgtgctaaaaagaaaattgaa
gtaggcaaagtacgttttgacaaaaccatagccacgcttcaaaaagaacgttccaaatta
gaaaagacttcattaacgcttaaagaagaagaaaccaaagcgcgtgaagaaagtaaaaaa
atggagactatcaatgtcaaaataaagcagaaattagagagttatcaggaattgtatgat
agcaatcaaaagacaatctatattggtcaaaaaattgaagatattgcagataagtatttc
aataataaaaataagaaagagctaattggcgaatttttaaaaattgttgaaattgaaaat
tccaagcgtaaaaaagcatctgcaaaagacacgaaagtaattgccgaaaagaaaaaagaa
gttattaaagaagtagcagttcaggtagaagaaatacgtgctgagaaaaaagccaaaaaa
gttaaagtagtggttgaaaaaccacgtccaattcttaaagtgggagatcgtgttagaatg
tttgacggaaaagcagtaggaagtatcgatgctattgaacgaaataaagctaccgttaat
tatggtttgtttacttcaaaggttggtttggaattactagagttggtagaagccattaaa
aagtaa
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