Flavobacterium ammonificans: SHINM13_16560
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Entry
SHINM13_16560 CDS
T08737
Symbol
ung
Name
(GenBank) uracil-DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
fao
Flavobacterium ammonificans
Pathway
fao03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
fao00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
SHINM13_16560 (ung)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
fao03400
]
SHINM13_16560 (ung)
Enzymes [BR:
fao01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
SHINM13_16560 (ung)
DNA repair and recombination proteins [BR:
fao03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
SHINM13_16560 (ung)
Prokaryotic type
SHINM13_16560 (ung)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
BDB57360
LinkDB
All DBs
Position
1909595..1910272
Genome browser
AA seq
225 aa
AA seq
DB search
MQILLNPEWQSILAEEIQKPYFSELLEMVDLEYQNYTCYPSKELIFSAFDSCSFSNTKVV
IIGQDPYHGKGEANGLCFSVNEGVKIPPSLRNIYRELVDDLDSIFMPNSGNLESWANQGV
LLLNAGLTVREDLPNSHKHLKWGKFTDAVIQKLSDEKEQVVFLLWGSFAQKKGVKIDREK
HLVLECGHPSPLSANQGKWFGNKHFSKTNAYLESRGLQPINWLNL
NT seq
678 nt
NT seq
+upstream
nt +downstream
nt
atgcaaatcctattgaatccagaatggcaatccattttagctgaagaaattcagaaaccc
tattttagtgagttactcgaaatggtagatttggagtatcaaaattatacctgttaccca
tctaaagaattgattttttcagcttttgactcttgtagcttttcaaataccaaagtggtg
attattgggcaagatccctatcacggaaaaggagaagctaatggattatgtttttcggta
aatgaaggggtaaaaatcccaccttcgttacgaaatatttacagagagttagtagatgat
ttggacagtatttttatgccaaattcaggaaatttagagtcttgggctaatcaaggtgtt
ttattattaaatgctggattaaccgttagggaagatttgcctaatagtcataagcattta
aaatgggggaaatttacggatgctgtgatccaaaagttatctgatgaaaaagaacaggtg
gtttttctactttggggaagttttgctcagaaaaaaggcgttaagattgatcgcgaaaag
catttggttttagaatgcggacatccatcaccattaagtgcaaatcaaggaaaatggttc
ggtaataagcattttagtaaaacgaatgcttatttagaatctagaggtttacaaccaatt
aattggctaaatctatag
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