Flavobacterium ammonificans: SHINM13_17160
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Entry
SHINM13_17160 CDS
T08737
Name
(GenBank) DNA polymerase III subunit epsilon
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
fao
Flavobacterium ammonificans
Pathway
fao03030
DNA replication
fao03430
Mismatch repair
fao03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
fao00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
SHINM13_17160
03430 Mismatch repair
SHINM13_17160
03440 Homologous recombination
SHINM13_17160
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
fao03032
]
SHINM13_17160
03400 DNA repair and recombination proteins [BR:
fao03400
]
SHINM13_17160
Enzymes [BR:
fao01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
SHINM13_17160
DNA replication proteins [BR:
fao03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
SHINM13_17160
DNA repair and recombination proteins [BR:
fao03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
SHINM13_17160
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Motif
Other DBs
NCBI-ProteinID:
BDB57420
LinkDB
All DBs
Position
1975099..1975695
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AA seq
198 aa
AA seq
DB search
MLDWLKNITKEHPEFWKEYLSKFDQKSNRYVILSTEKTGLNPDKDVILSFGCFGVVNDSL
LIGDNFEVVLLQYKFLHDNELSNEFIVESKLQKLGEPEAIQSLLQYIGNATLVGYRIDTD
VEIINTALEKMDCGRLKNEPLDLEIMHCRLNDINNKQFTLDELCTLYKVPISDRNSASEE
AYKMGLLFLKLKSRLGLK
NT seq
597 nt
NT seq
+upstream
nt +downstream
nt
atgttagattggcttaaaaatattactaaagaacatcctgaattctggaaggaataccta
tctaaatttgaccaaaaatcaaaccgatatgtcattctttctaccgaaaaaacgggatta
aatccagacaaagacgttattctgtcttttggatgttttggagtagttaatgatagtttg
cttattggagataattttgaagtagttctattacaatacaaatttctgcatgataatgaa
ctttctaacgagtttattgtagaaagtaaacttcaaaaattaggagaacccgaagcaatt
caatccttattacaatatattggcaatgctactttagttggataccgaattgatacagat
gtagaaataatcaataccgcgttagaaaaaatggattgtggaaggcttaaaaatgaacca
cttgatctagaaattatgcattgcagattgaatgacatcaataacaaacaattcacatta
gacgaattatgtactttgtataaagttccaataagtgaccgaaactctgcatcggaagaa
gcctataaaatgggattgttgtttttaaaattaaaatccagattaggattaaaataa
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