Flavobacterium ammonificans: SHINM13_18030
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Entry
SHINM13_18030 CDS
T08737
Symbol
gyrA
Name
(GenBank) DNA gyrase subunit A
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
fao
Flavobacterium ammonificans
Brite
KEGG Orthology (KO) [BR:
fao00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
fao03032
]
SHINM13_18030 (gyrA)
03400 DNA repair and recombination proteins [BR:
fao03400
]
SHINM13_18030 (gyrA)
Enzymes [BR:
fao01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
SHINM13_18030 (gyrA)
DNA replication proteins [BR:
fao03032
]
Prokaryotic type
DNA Topoisomerases
SHINM13_18030 (gyrA)
DNA repair and recombination proteins [BR:
fao03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
SHINM13_18030 (gyrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
Motif
Other DBs
NCBI-ProteinID:
BDB57507
LinkDB
All DBs
Position
complement(2073084..2075705)
Genome browser
AA seq
873 aa
AA seq
DB search
MSEGEKLIPINIEDEMKSAYIDYSMSVIVSRALPDVRDGLKPVHRRVLYGMYDLGVFSNK
AHKKSARIVGEVLGKYHPHGDTSVYDAMVRMAQEWSMRYLLVDGQGNFGSVDGDSPAAMR
YTEARMRKISEEIMADIEKETVDFQLNFDDTLYEPKVMPTRVPTLLINGATGIAVGMATN
MPPHNLTEVINGTIAYIENNDIEIDELITHIKAPDFPTGGIIYGYEGVREAFKTGRGRVV
IRAKVGFEEVDGRESIIVTEIPYQVNKADMIKRTADLVNEKKIEGIANIRDESDRNGMRI
VYILKRDATPNVVLNTLYKYTQLQSSFSVNNIALVKGRPETLNLKDMIHHFVEHRHDVVI
RRTQFELRKAEERAHILEGLIIASDNIDEVIALIKASKNTDEAKEKLIERFKLSDIQARA
IVEMRLRQLTGLEQDKLRAEYEEIMKLIEHLRALLADVNLRIALIKEELIEIRDKYGDER
RSQIEYSGGDVSIEDLIADENVVITISHAGYIKRTNLSEYKTQNRGGVGQKSAGTRDQDF
LEHMFVATNHQYMMFFTQKGKCFWMRVYEIPEGSKTAKGRALQNLINIESDDKVKAFICT
QDLKDKEYVSSHNLVMVTKQGQVKKTSLEKYSKPRVNGVAAITIKEGDELLAAQLTNGES
QIILAVKSGKLVRFEETKTRPMGRTASGVRGITLKDDKDEVIGMVTVNDMSSEILVVAEN
GYGKRSSLDEYRITNRGGKGVKTLNITEKTGQLISINAVTDNDDLMIINKSGLTIRMAVE
DLRVMGRATQGVKLINIKGNDSIAAVTKVMKDDPAEIELDEDGNPIEVEVIERVKPVLEV
LEDDGAADDDDEEDEEIEDEEDIDDTDEDDSDE
NT seq
2622 nt
NT seq
+upstream
nt +downstream
nt
atgtctgaaggagaaaagttaattcctattaacatagaagatgaaatgaaatcagcttac
atcgattattcgatgtcggtaattgtatcaagagcacttccagatgttagagacggttta
aaaccggtgcatcgaagagtactttatggaatgtatgatttaggagttttttcaaataaa
gcccacaaaaaatccgcaagaattgttggagaagttttaggtaagtaccaccctcatggt
gacacctctgtttatgacgctatggtgcgtatggctcaagaatggagtatgcgttattta
ttagttgatggacaaggtaactttggttctgtcgatggtgatagtccagcagcaatgcgt
tatactgaggctagaatgcgtaagatttcggaagaaattatggctgatatcgaaaaagag
acagtggactttcaactgaactttgacgataccttgtatgagccgaaagtaatgccaaca
cgagttcctaccttattaattaatggagctacaggtattgctgtaggtatggcaaccaat
atgccgccgcacaatttaactgaagtaattaatggaaccattgcttatattgagaataac
gatattgaaatagacgaattaatcactcatattaaagcgcctgatttcccgacaggtgga
attatttacggatatgaaggtgttcgtgaagcatttaaaacaggtcgtggacgtgtcgtt
attcgtgctaaagtaggttttgaagaagttgatggtagagaatctatcattgtgactgaa
attccgtaccaagtgaataaagcagatatgatcaaacgtactgctgatttggtaaacgaa
aagaaaattgaaggtattgccaatattcgtgatgaatcggatagaaatggtatgcgtatc
gtgtatatcttgaaacgtgatgctacaccaaatgtagtattgaataccttatataagtat
acccaattacaatcatcatttagtgttaataatattgccttagtaaaagggcgtccagaa
acgttgaatctgaaagatatgattcatcatttcgtagaacaccgtcatgatgtggtaatt
cgtagaacacaatttgaattacgaaaagcagaggaaagagcccatattttagaaggatta
attattgcttcggataacattgacgaagtaattgctttaatcaaagcgtctaaaaacacg
gatgaagccaaagaaaaattaatcgagagattcaaattatcggatattcaagcacgtgct
attgttgaaatgcgtttacgtcaattgacaggtttagagcaagataaattgcgtgctgag
tacgaagaaatcatgaagttaattgagcatttaagagctttattagccgatgtgaatttg
agaattgcattaattaaagaagagttaattgaaatcagagataaatatggtgatgagcgt
cgttctcaaatcgaatattctggtggagatgtaagtattgaagacttaattgctgatgaa
aatgtagtgattactatttcgcacgcagggtatattaagcgtacgaacttgtctgagtac
aaaactcaaaatagaggaggagtaggacaaaaaagtgctggaacccgtgaccaagatttc
ttagaacacatgtttgtggctacgaatcaccagtacatgatgttctttacgcaaaaagga
aaatgtttctggatgcgtgtgtacgaaattccagaaggaagtaaaactgctaaaggaaga
gcgttacagaacttaatcaacattgagtcagatgataaagtgaaagcatttatctgtaca
caagacttgaaagataaagagtatgtaagcagtcataatttagtaatggtaactaaacaa
ggacaggtaaagaaaacgtctttagagaaatattctaaacctcgagtgaatggtgttgct
gccattacgattaaagaaggcgacgaattattagcggctcaattaaccaacggtgagagt
caaattattttggctgttaaatctggtaaattagttcgttttgaagaaactaaaacccgt
ccaatgggaagaacagcttctggagttcgtggtattactttaaaagatgacaaagacgaa
gtaatcggaatggtaacggtaaacgatatgagcagcgaaattttagttgttgctgaaaat
ggttacggtaaacgttctagcctagatgagtacagaatcacgaatcgtggaggaaaaggg
gtgaaaaccttgaatattactgagaaaacaggtcagttgatctcgatcaatgctgtgact
gacaatgacgacttgatgattatcaacaaatcaggattgactatcagaatggcagtggaa
gatcttcgtgtaatgggacgtgctactcaaggtgttaaattaatcaacatcaaaggaaac
gattctattgcagcggtaactaaagtaatgaaagacgatccagctgaaattgaattagac
gaagatggcaatccaattgaagtcgaagttattgaaagagtgaagcctgttctagaagta
ctagaagatgatggcgctgcagatgacgacgatgaagaagacgaggaaatcgaagacgaa
gaagatatcgatgatactgatgaagacgattcagacgaataa
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