Flavobacterium ammonificans: SHINM13_18440
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Entry
SHINM13_18440 CDS
T08737
Symbol
uvrA2
Name
(GenBank) UvrABC system protein A
KO
K03701
excinuclease ABC subunit A
Organism
fao
Flavobacterium ammonificans
Pathway
fao03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
fao00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
SHINM13_18440 (uvrA2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
fao03400
]
SHINM13_18440 (uvrA2)
DNA repair and recombination proteins [BR:
fao03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
SHINM13_18440 (uvrA2)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
SHINM13_18440 (uvrA2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrA_inter
UvrA_DNA-bind
ABC_tran
SMC_N
AAA_16
AAA_29
RsgA_GTPase
DnaJ_CXXCXGXG
nSTAND1
AAA_22
nSTAND3
AAA_23
Viral_helicase1
AAA_18
cobW
AAA_21
PDC10_C
Motif
Other DBs
NCBI-ProteinID:
BDB57548
LinkDB
All DBs
Position
2123700..2126531
Genome browser
AA seq
943 aa
AA seq
DB search
MVETENTIDVQGARVHNLKNIDISIPREQLVVITGLSGSGKSSLAFDTIYAEGQRRYVET
FSAYARQFLGGLERPDVDKIDGLSPVIAIEQKTTSKSPRSTVGTITEIYDFLRLLYARGA
DAYSYNTGEKMVSYSDEQIKELIIQDFTGKRINILAPIIRARKGHYAELFQQITKQGFLK
VRVNGEIQDLVSGMKLDRYKTHDIEIVVDRLLVDNSEDNQKRLSESINTAMHHGENVLMV
LDQDSNEVRYFSRNLMCPTTGISYQNPEPNLFSFNSPKGACANCNGLGTVNEINRKKIIP
NPKLSIKNGGFAPLGEYKSSWIFKQLEIIGEKYGFKLTDAVETISEEAMEMILNGGKEKF
TINSKDLGVTREYKIDFEGIAHFIKNQHDESGSATIKRWAKEFMDEVKCPECEGSRLKKE
ALFFKVNDKNIAELSDLDISDLTKWFQELESQLTDKQKKIASEVIKEIKDRLDFLMNVGL
NYLALSRSSKSLSGGEAQRIRLATQIGSQLVGVLYILDEPSIGLHQRDNEKLIHSLEQLR
DIGNSVIVVEHDKDMIERADYVIDIGPRAGKYGGEIISQGTPAEILKSNTITAQFMNGDM
KIEVPKKRREGNGKFLKLTGATGNNLKNVSIELPLGQLICVTGVSGSGKSTLINETLYPI
LNAYYFNGVKKPQPYTKIEGLENIDKVIDIDQSPIGRTPRSNPATYTEVFSEIRNLFTMT
SESMIRGYKAGRFSFNVNGGRCETCEGSGVRTIEMNFLPDVYVECETCQGKRFNRETLEI
RYKGKSISDVLNMTVDEAVPFFENIPKIYRKVKTIQEVGLGYITLGQQSTTLSGGEAQRI
KLAGELSKKDTGNTFYILDEPTTGLHFEDIRVLMGVINKLVDKGNTILIIEHNMDVIKLA
DYIIDIGPEGGKGGGQLVAKGTPEEIIKNKKSYTAQFLKKELV
NT seq
2832 nt
NT seq
+upstream
nt +downstream
nt
atggtagaaactgagaatacaattgacgttcaaggcgcgcgcgttcacaacctaaaaaac
atcgatatttcaattccgcgtgaacaattagtggtgatcactgggctttcgggttctgga
aaatcatccttggcttttgataccatttatgccgaaggtcaacgtcgttatgtcgaaacc
ttctcggcctatgcacgacagtttttaggcggattagaacgtccagatgtagataaaatt
gatggactttcacccgtaattgccattgagcaaaaaacaactagtaaaagtcctcgctca
actgtggggacaattactgaaatctatgattttttacgtttgttgtatgcccgtggtgct
gatgcctatagttacaatacgggagaaaaaatggtttcgtactctgatgagcaaatcaaa
gagttgataattcaagattttacaggtaaacgaatcaatattttagcaccaattatccga
gctagaaaaggacattatgctgagcttttccaacaaatcaccaagcaaggttttttaaaa
gtgcgtgtgaatggtgaaattcaagatttggttagtggcatgaaattagatcgttataaa
acccatgacattgaaattgtagtcgatagactcctagtcgacaacagcgaagacaatcag
aaaagattgtcagaaagcattaacacggcgatgcatcatggtgaaaatgtattaatggtt
ttagatcaagattccaacgaagtacgctattttagtaggaatttaatgtgtccaactacc
gggatttcgtatcaaaatccagaacctaatttattttctttcaattcaccaaaaggcgct
tgtgcgaattgtaacggattgggaacagtgaatgaaatcaatcgtaaaaaaattattccg
aatcctaaattatccattaaaaacggaggatttgctcctttgggagaatacaaatcatct
tggatttttaagcaattggaaattataggtgagaaatatggtttcaagttaaccgatgcg
gtagaaaccatttcggaagaagccatggaaatgattttgaacggcggaaaagaaaaattt
accatcaattcaaaagatttaggtgtaaccagagaatacaaaatagactttgagggtatt
gctcattttatcaaaaaccaacacgacgaaagtggttcggctacaattaaacgctgggct
aaagaatttatggacgaagtaaaatgtcctgaatgtgagggttcacgattgaaaaaagaa
gcattgttttttaaagtaaacgataaaaatattgccgaattaagcgatttagatatttca
gatttgaccaaatggttccaagaattagaaagtcagttaactgacaaacaaaaaaagatt
gcttctgaagtcatcaaagaaatcaaagaccgattggatttcttaatgaatgtgggattg
aattatttggcattaagccgaagttcaaaatccctttcgggtggtgaagcacaacgcatt
cgactagctactcaaattggttcacagttagttggcgtgttgtatattttggacgaacca
agtattggtttacaccaaagagacaacgagaaattgattcattctttggaacaattacga
gatattggcaattcagtcatagtggtagaacacgataaagacatgattgaacgtgccgat
tatgtgattgatattggtccaagagctggaaaatatggtggtgaaatcatcagtcaagga
acgcctgctgagattttaaaaagcaatacgattaccgctcaatttatgaatggcgatatg
aaaatcgaagttcctaaaaagcgtcgcgaaggcaatggtaaattcttaaaactaacaggc
gccacaggaaacaatttaaaaaatgtttccatcgaattgcctttaggacaactaatttgc
gtgacgggagtttcaggtagtggaaaatctactttgattaacgagaccctctaccctatt
ttaaacgcctactatttcaacggagttaaaaaaccacaaccttacacaaaaattgaaggt
ttagaaaacattgacaaggttattgatattgatcaaagtccaattgggcgtacgccaagg
tcgaatccagctacatatactgaagtattttctgagattcgaaatttatttacgatgact
tctgaaagtatgattcgcggttataaagctggtcgttttagttttaacgtaaatggcggt
cgttgtgaaacttgtgaaggttcgggggtacgaactattgaaatgaactttttacccgat
gtttatgtagaatgcgaaacttgtcaaggaaaacgttttaacagagaaactttggagatt
cgatataaaggaaagtccatttcggatgtattgaatatgacagtggatgaagctgttcct
ttctttgaaaacattccgaaaatttaccgaaaagtaaaaaccattcaggaagtaggattg
ggttatatcactttaggacaacaaagcacaacactctcgggaggcgaagcacaacgtatc
aaactagctggcgaattgtcgaaaaaagacacaggaaatactttctatattttagacgag
cctactactggattgcattttgaagacattcgggttttgatgggcgtaattaataaattg
gtagacaaaggcaataccattttaattattgaacacaatatggatgtgattaaactagcc
gattacattattgatattggcccagaaggtggaaaaggtggtggacaactagttgcaaaa
ggaactcccgaagaaataattaaaaataaaaaaagttacactgcgcaatttttgaaaaaa
gaattagtttag
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