Flavobacterium ammonificans: SHINM13_20530
Help
Entry
SHINM13_20530 CDS
T08737
Symbol
cysS
Name
(GenBank) cysteine--tRNA ligase
KO
K01883
cysteinyl-tRNA synthetase [EC:
6.1.1.16
]
Organism
fao
Flavobacterium ammonificans
Pathway
fao00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
fao00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
SHINM13_20530 (cysS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
fao01007
]
SHINM13_20530 (cysS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
fao03016
]
SHINM13_20530 (cysS)
Enzymes [BR:
fao01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.16 cysteine---tRNA ligase
SHINM13_20530 (cysS)
Amino acid related enzymes [BR:
fao01007
]
Aminoacyl-tRNA synthetase
Class I (G)
SHINM13_20530 (cysS)
Transfer RNA biogenesis [BR:
fao03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
SHINM13_20530 (cysS)
Prokaryotic type
SHINM13_20530 (cysS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1e
DALR_2
tRNA-synt_1g
CysS_C
tRNA-synt_1f
tRNA-synt_1
Motif
Other DBs
NCBI-ProteinID:
BDB57757
LinkDB
All DBs
Position
2360749..2362227
Genome browser
AA seq
492 aa
AA seq
DB search
MPLYKSQQLKIYNSLSGEKEVFTPIHEGNVGMYVCGPTVYSNVHLGNLRTFMSFDVIFRY
FQHLDYKVRYVRNITDVGHIVDDVDEGEDKIAKKARLEQLEPMEVVQRYTVDFHEILSAF
NFLPPSIEPTATGHIIEQIEIIKKIIDAGIGYEANGSVYFDVVKFNETNHYGRLSGRNIE
EMLANTRDLDGQSDKRNPQDFALWKKAEPQHIMRWPSPWSDGFPGWHLECTAMSTKYLGN
HFDIHGGGMDLKFPHHECEIAQNEACTGQTPVNYWLHANMLTLNGKKMAKSTGNNILPRE
ILTGENTILSKAFSASVTRFFMLQAHYRSILDFSDDAIVAAEKGYKRLMEAMSSLESITA
AAQSTLNIAEWKQLCYDAMNDDFNTPILIAQLFEGVRFVNVLKEGKESLTAEDLKIFTTA
MNGFVFEVLGLEDEKISDGNNDKLEGTVNLLIEMRKQARENKNFALSDQIRDQLLALGIQ
LKDGKEGTTFSL
NT seq
1479 nt
NT seq
+upstream
nt +downstream
nt
atgccattatataaaagtcaacaactgaaaatatacaattctctttcgggagaaaaagaa
gtctttacgcctattcatgaaggaaatgttgggatgtatgtttgcggcccgacggtgtac
agtaatgtgcatttaggaaacttgagaacttttatgtcgtttgatgtgatttttaggtat
ttccaacatttggattacaaggtacgttatgtgcgcaacattaccgatgtagggcatatt
gtggacgatgtggatgaaggtgaagataaaattgccaaaaaagcgcgtttggaacaattg
gaaccgatggaagtagtgcaacgatacaccgtggattttcatgaaattttaagtgctttt
aatttcttaccgccaagtattgaacctacggctacggggcatattattgaacaaatcgaa
atcatcaagaaaataatcgatgccggaattggctatgaagccaatggatcggtgtatttt
gatgtagtaaaatttaacgaaacaaaccattacgggcgtttgagtggcagaaatattgaa
gaaatgttagccaacactcgtgatttagatggacaatcggataaacgaaatccgcaagat
tttgctttatggaaaaaagccgaaccacaacatattatgcgttggccttcgccttggagc
gatggttttccaggttggcacctggaatgtacagccatgagtaccaagtatttggggaat
cattttgacatccacggtggcggaatggatttgaaatttccacatcatgaatgtgaaatt
gcacaaaatgaggcttgtacaggtcaaactcctgtaaattattggcttcacgccaatatg
ttgaccctgaatggcaaaaaaatggcaaaatcgactggaaataatattttgccaagagag
atattgactggtgagaatacgattttaagcaaggctttttcagcttcagtgacgcgtttc
tttatgttgcaagcccattacagaagtattttggatttttctgatgatgctattgtagca
gctgaaaaaggatacaaacgtttgatggaagcgatgagtagtttagaatcgattactgca
gctgctcaaagtacattgaatattgccgagtggaagcaattgtgctatgatgccatgaac
gatgattttaacacgcctattttaattgcgcagttgtttgaaggcgttcgttttgtgaat
gtactaaaagaaggtaaagaaagcttaactgccgaagatttgaaaatatttactaccgca
atgaacggttttgtttttgaggttctaggcttagaagacgagaaaataagcgatggaaac
aacgacaaattagaaggtacagtaaacttgcttatcgaaatgcgtaagcaagccagagag
aataaaaactttgctttgtctgaccaaattagagatcaattgttggctttaggcattcaa
ttgaaagacggtaaagaaggaactacgtttagcttgtaa
DBGET
integrated database retrieval system
