KEGG   Flavobacterium ammonificans: SHINM13_20560
Entry
SHINM13_20560     CDS       T08737                                 
Symbol
secDF
Name
(GenBank) protein translocase subunit SecDF
  KO
K12257  SecD/SecF fusion protein
Organism
fao  Flavobacterium ammonificans
Pathway
fao02024  Quorum sensing
fao03060  Protein export
fao03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:fao00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03060 Protein export
    SHINM13_20560 (secDF)
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    SHINM13_20560 (secDF)
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    SHINM13_20560 (secDF)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:fao02044]
    SHINM13_20560 (secDF)
Secretion system [BR:fao02044]
 Sec (secretion) system
  Prokaryotic Sec-SRP core components
   SHINM13_20560 (secDF)
SSDB
Motif
Pfam: SecD_SecF_C SecDF_P1_head SecD_1st Sec_GG ACR_tran MMPL VP1_VP3
Other DBs
NCBI-ProteinID: BDB57760
LinkDB
Position
complement(2365791..2368763)
AA seq 990 aa
MQNKGLIKFFAILFALVSIYQLSFTFIANSVASDAKAFAGGNPEKELKYLDSIGKEKVLN
LGFSDFTYNEVKDKQINKGLDLEGGINVILQVSVKDILKGLSNYSKNPVFNKSLDDATAN
QKGNQTYIDAFFEAFEANSNGTVKLASPDIFANRNLQGEGGVDFQMTDAQVKKVIKRKVD
ESVESAFGVLRKRIDKFGVTQPNIQKLGESGRILVELPGAKDVDRIKKLLQSTAQLEFWE
TYKIEEIGNFLMAANESLKKTEINKTAPQKVVKDSLSALLADTKDADATKKGNNPLLDKI
IAQGGGPVLGLFAPKDTATVGEYLRRADIRILLAGDQRYAKFVWGKPTKIKDAKSKEIDA
VELYALKGNRDNIAAMSGGVVTDASDTFDQLGKPAVSMQMNGKGAKAWEELTGRAYTQKS
NIAIVLDNVVYSAPGVSSGPIAGGRSEISGDFDVTETKDLANVLKAGKLPASADIIQSEV
VGPSLGQAAIDAGTTSSIVGFLLVCFWMVFYYGRAGWYANLALFLNLLFLFGIMASFGFV
LTLPGIAGIVLTLGTAVDANIIIYERAKEELREGKSLTDTVIASYGWKGAMRSIIDANVT
HILTGAILFIFGTGLIKGFALTLLIGIVTSLFTSIFIARIFIDRNVSTVNNLTFSTSITK
NWFTNFNFDYIRIKKVTYVISSIVVIVSLISIFFVNGLDQGTDFVGGRTFQVKFEKPIDA
SVVAEELSKEFGTTVEAKIFGSDNQLKLTTKYKITEEGLDVDKEVNEKLYAGLKKYYNGI
TYDQFINSYDGKKVGVLQASKVGASISEDIKTNSYWAVIGAMAVIFLYLMISFRKWQYSL
GAIAAVAHDVIFVLGIYSLCYKFMPFHMEMDQHFIAAILTVIGYSMNDTVIVFDRIREFI
LGKRKGTFEEIVNASINTTLSRTLNTSLLMIIVLLTMFIFGGESIRGFIFAMLIGIFVGT
YSSLFIATPVLVDTISREEKNQIEKNHKGA
NT seq 2973 nt   +upstreamnt  +downstreamnt
atgcagaataaaggcctcattaaatttttcgcaattctatttgcattggtaagtatttac
caactttctttcactttcatagctaactcagtagctagcgatgctaaagcttttgcaggt
ggaaatcctgaaaaagagttaaaatatttggattcgattggtaaagaaaaagtattaaat
cttggattttctgattttacttataacgaagtaaaagataagcaaatcaataaaggtctt
gacttagaaggaggaatcaacgtgattcttcaagtttctgttaaagacattttgaaaggt
ttatctaattattctaaaaacccagttttcaataaatcgttagatgatgctacggctaat
caaaaagggaaccaaacctatattgatgctttttttgaagcttttgaagctaactcaaat
ggaaccgtaaaattagcttctcctgatatttttgctaacagaaatttacaaggtgaaggt
ggagtagatttccaaatgacggatgctcaagtaaaaaaggtaatcaaaagaaaagttgat
gaatctgttgaaagtgcttttggagtattaagaaaacgtatagacaaattcggagtaaca
caacctaatattcaaaagttaggagagtctggaagaatcttagttgaattgccaggtgct
aaagatgttgatagaattaaaaaattattacaaagtactgctcaattagagttttgggaa
acctataaaattgaagaaattggaaactttttaatggctgcaaatgagtcattgaagaaa
accgaaatcaacaaaacggctcctcaaaaagtggttaaggattcattaagtgctttattg
gctgatactaaagatgctgatgctactaaaaaaggaaacaatcctttattagataaaatt
attgcacaaggtggtggaccagttttaggattatttgctccaaaagataccgctactgtt
ggtgagtatttaagaagagctgatattagaattttattagcaggtgaccaacgttatgct
aaatttgtttggggaaaaccaactaaaattaaagatgcaaaatcaaaagaaatcgatgcg
gttgaattgtatgctctaaaaggaaatagagataacattgctgcaatgagtggtggtgta
gtaactgatgcaagtgatacttttgaccaacttggaaaaccagctgtttctatgcaaatg
aatggtaaaggagcaaaagcttgggaagaattaacaggtagagcttacactcaaaaaagc
aatattgctattgttttggataacgttgtatattctgctccaggagtttctagcggacca
attgctggtggaagatcagaaatctctggtgattttgatgttactgaaacaaaagattta
gctaatgttttaaaagcaggtaaattaccagcttctgcagacatcattcaatctgaagtg
gttggaccatctttaggacaagcagctattgatgcgggtacaacatcctctattgttgga
tttttattagtttgcttttggatggtgttttattacggtagagcaggttggtatgctaat
ttagctttgttcttaaacttgttattcttattcggaattatggctagttttggttttgtt
ttgaccttgccaggtattgcgggtattgttttaacattaggtactgcggttgatgcaaac
atcatcatttacgaaagagccaaagaagaattgcgagaaggaaaatcattaacggataca
gtaattgcttcttatggatggaaaggtgctatgagatcaatcattgatgctaacgttact
cacattttaactggagcgatcttatttatttttggaacaggattgattaaaggttttgcc
ttaactttattaattggtattgtaacttcattatttacttcgatttttattgctagaatt
ttcatcgacagaaatgtgagtactgtaaataacttaacattttcaacgtctatcacaaaa
aattggttcaccaattttaactttgactacatacgtattaagaaagtaacttatgttatt
tcatctatcgttgttattgtaagtttaatttcaattttctttgtgaatggattggatcaa
ggaactgattttgttggaggtagaacattccaagttaaatttgaaaaaccaattgatgct
tcagtagtagcagaagaattatcaaaagagtttggaacaacagttgaggctaagattttc
ggatctgataatcaattgaaattgactaccaaatataaaattactgaagaaggtcttgat
gtagataaagaagtaaacgagaaattgtatgctggattgaaaaaatactataatggtatt
acttacgatcaattcattaattcatacgatggaaaaaaagtaggagttttacaagcttct
aaggtaggtgcttctatttctgaagatatcaaaacaaattcgtattgggctgtaattggt
gcaatggcagttatattcttgtacttaatgatctctttccgtaagtggcagtattcatta
ggagcaattgctgcagtagcgcacgacgtaatttttgttttaggaatttactctttatgt
tataagtttatgcctttccatatggaaatggaccaacattttattgcagctattcttact
gtaattgggtactctatgaatgatactgtaattgtatttgatagaattagagagtttatt
ttaggtaaacgtaaaggtacttttgaagaaatcgtaaatgcttctattaacactacttta
tctagaacattaaatacttcattattaatgattattgtattattgacgatgttcatattt
ggaggagaatcaattagaggatttatctttgcgatgttaataggtatttttgttggaact
tattcttcactatttattgcaactcctgttttagttgatacaatttctagagaagagaaa
aaccaaattgaaaaaaatcataaaggagcataa

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