Flavobacterium ammonificans: SHINM13_20860
Help
Entry
SHINM13_20860 CDS
T08737
Symbol
hisS
Name
(GenBank) histidine--tRNA ligase
KO
K01892
histidyl-tRNA synthetase [EC:
6.1.1.21
]
Organism
fao
Flavobacterium ammonificans
Pathway
fao00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
fao00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
SHINM13_20860 (hisS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
fao01007
]
SHINM13_20860 (hisS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
fao03016
]
SHINM13_20860 (hisS)
Enzymes [BR:
fao01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.21 histidine---tRNA ligase
SHINM13_20860 (hisS)
Amino acid related enzymes [BR:
fao01007
]
Aminoacyl-tRNA synthetase
Class II (A)
SHINM13_20860 (hisS)
Transfer RNA biogenesis [BR:
fao03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
SHINM13_20860 (hisS)
Prokaryotic type
SHINM13_20860 (hisS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_His
HGTP_anticodon
tRNA-synt_2d
Motif
Other DBs
NCBI-ProteinID:
BDB57790
LinkDB
All DBs
Position
complement(2402286..2403656)
Genome browser
AA seq
456 aa
AA seq
DB search
MASKPIIPKGTRDFSPTEVAKRQYILQMIKSNFEKFGFQPIETPSFENSETLMGKYGEEG
DRLIFKILNSGDYLAKANATHLEAKDSTKLTSSISEKALRYDLTVPFARYVVQHQNEIEF
PFKRYQIQPVWRADRPQKGRFREFFQCDADVVGSTSLWQEVELIQLYDGVFTALGLNGVT
IKINNRKILSGIAEVIGASDKLIDFTVALDKLDKIGEEGVKKEMMEKGILETAIAKVQPL
FSFTGTFSDKINQLSGLLADSVEGMKGVEELRFICDKVSALGLATAILDLDVTLARGLNY
YTGAIFEVAAPAGVAMGSIGGGGRYDDLTGIFGLKNMSGVGISFGLDRIYLVVEELGLFP
TTVTATSQALFINYGENEAFYAMKAIKELRQSGIKVELYPDNAKLAKQFQHADKRSIPFA
VMAGDQEMNSNTYTLKNLQTGEQKSLSLEELKKVLS
NT seq
1371 nt
NT seq
+upstream
nt +downstream
nt
atggcatctaaaccaattattccaaaaggaactcgagatttttcacctacagaggttgca
aaacgtcagtatattctccaaatgatcaaaagtaattttgagaaatttggttttcaaccg
attgaaaccccttcttttgaaaattccgaaaccttaatgggaaaatatggtgaagaagga
gatcgcttgatttttaaaattttgaattcaggagattatttggcaaaagccaatgcaact
catttggaagccaaagacagtacaaaattgacttcaagtatttcagaaaaagccttgcgt
tatgatttgacagtgccttttgcccggtatgtggtgcaacaccaaaacgaaattgaattt
ccttttaaaagataccaaatccaacccgtttggagagccgatcgtcctcaaaaaggccgc
ttcagagaattttttcaatgtgatgccgatgtagtaggttcgacctctttgtggcaagaa
gtagaattaattcaattgtatgatggggtatttactgctttaggtttgaatggggtaact
attaaaatcaacaatagaaaaatcctttctggaattgcagaagtgattggtgcttcggat
aaattaatcgattttacagtggctttggataagctggataaaattggcgaagaaggagta
aaaaaagaaatgatggagaaagggattttggaaacggctattgctaaggtgcaacctttg
tttagttttacgggaactttttcggataaaatcaatcaattatccggtttattagcggat
tcagttgaaggtatgaaaggggtagaagaattgcgctttatttgtgataaagtatcagct
cttggtttagcaactgctattttagatttggatgtgactttggcaagaggattgaattat
tatacaggcgctatttttgaggtggcagcaccagcaggagtagctatgggttctatcggt
ggtggtggtcgttacgatgatttgacgggtatttttggtttaaaaaatatgagtggagtg
ggaatctcttttggtttagaccgtatttatttggtcgtagaagaattgggattgttccca
acgacagttaccgcaacttcgcaagcattgtttattaattatggcgaaaatgaagcgttt
tacgctatgaaagcgattaaagaattgcgccaatcgggaataaaagtagaattgtatcca
gacaacgctaagttggccaaacaatttcaacacgctgataaaagaagtattccttttgct
gtaatggccggagatcaagagatgaattcgaatacctatactttgaaaaaccttcaaacg
ggagaacagaaatcactcagtttagaggaactgaaaaaagttttatcataa
DBGET
integrated database retrieval system
