KEGG   Falsirhodobacter algicola: GR316_04000
Entry
GR316_04000       CDS       T07373                                 
Name
(GenBank) MBL fold metallo-hydrolase
  KO
K12574  ribonuclease J [EC:3.1.-.-]
Organism
fap  Falsirhodobacter algicola
Pathway
fap03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:fap00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    GR316_04000
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:fap03019]
    GR316_04000
Messenger RNA biogenesis [BR:fap03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     GR316_04000
SSDB
Motif
Pfam: RNase_J_b_CASP RNase_J_C Lactamase_B Lactamase_B_2 RMMBL Anti-Pycsar_Apyc1 Lactamase_B_6
Other DBs
NCBI-ProteinID: QUS35505
UniProt: A0A8J8MRQ1
LinkDB
Position
complement(789878..791554)
AA seq 558 aa
MTDERLIYLPLGGAGEIGMNCYVYGYGLPGRERLIVVDLGVTFPDMDTTPGIDLIMPDVS
WLEKRADQIEAIFITHAHEDHIGALAHMWPKLKAPVYARRFTAAIGRYKLEDQGLPKDTI
TTVEARPDVVEAGPFSVQFVPISHSVPESSALVIDSPAGRVLHTGDFKLDPAPVVGEPWD
PATYAAIAEERPVKALMCDSTNIFTQHPGRSESTLTGPLRELIGGARGMVVATTFASNVA
RLKTLAEAARASGRSVCLLGRAMRRMVATATETGILQDFPPTISPEQVLEMPRDNVLLIV
TGSQGERRAASAQLARGKYLGIELKEGDLFLFSSRTIPGNEREVGRIMNALSEKGVDLQD
DAGGLYHVSGHANRPDLVTVHSVVKPELLIPMHGEHRHLREHARVGAEGGTRSLLVTNGA
MIDLTGDAPKIVERVETRRSYLDGSILIGAFDGVVRDRIRLALNGHVMINVILDESDDLL
GDVWVEVMGLPERGQSGGILSETLERELTEYLEGAGAKLLNNDDRLEEALRRMVRQIGVV
EIGKKPETTVTISRLQDE
NT seq 1677 nt   +upstreamnt  +downstreamnt
atgacggatgaacggctgatctaccttccccttggcggcgcaggggagatcggcatgaac
tgttacgtctatggctacgggcttccggggcgggagcgtctgatcgtcgtggatctgggc
gtgacattccccgacatggacacgacgcccggcatcgacctgatcatgcccgacgtgtcg
tggctggagaaacgcgccgaccagatcgaggcgatcttcatcacccacgcgcacgaagat
cacatcggcgcgctggcgcatatgtggccgaagctgaaggcgccggtctatgcgcgccgc
ttcaccgccgcgatcggccggtacaagctggaagatcaaggcctgccgaaggacacgatc
accacggtcgaggcgcgtcccgatgtcgtggaggcggggccgttctcggttcagttcgta
ccgatcagccattcggtgcccgaaagctctgcgctggtgatcgacagcccggccggccgc
gtgctgcatacgggcgacttcaagctcgatcccgcgccggtggtgggggagccgtgggac
cccgcgacctatgccgccatcgccgaggaacgtccggtgaaggcgctgatgtgcgattcc
accaatatcttcacgcagcatccgggccgttcggaaagcacgctgaccggcccgctgcgc
gagctgatcggtggggcacgcggaatggtcgtggcgacaaccttcgcgtcgaacgtcgcg
cgcctgaagaccttggccgaagcggcccgcgcctcggggcggtcggtctgccttctgggc
cgcgcgatgcgccgcatggtcgccacggcgaccgagacgggcatccttcaggatttcccg
ccgaccatcagccccgagcaagtgctggagatgccgcgcgacaacgtgctgctgatcgtc
accggctctcagggggaacggcgcgcagcgtcggcccaactggcccgcggcaaatatctc
gggatcgaactgaaggagggggatctcttcctcttctcctcgcggaccattccgggcaat
gagcgcgaagttggccggatcatgaacgcgctttccgaaaaaggcgttgatcttcaggac
gatgcgggcggtctttaccacgtttcgggccatgcgaaccgtcccgatctggtcacggtc
cattccgtcgtgaaaccggaactgctgatcccgatgcatggtgaacaccgccatctgcgc
gaacatgcgcgggtcggggccgaaggcggcacgcgctcgcttctggtcacgaacggcgcg
atgatcgatctgacgggcgatgcccccaagatcgtggagcgggtggagacgcggcgcagc
tacctcgacggctcgatcctgatcggggccttcgacggcgtggtgcgcgatcggatccgt
ctggcgctgaacggccatgtgatgatcaacgtcatcttggacgagagcgacgatcttctg
ggcgatgtctgggtggaggtcatgggccttcccgagcgtggccagagcggcggcatcctg
tcggaaacgctcgaacgggaattgacggaatatctcgaaggcgcgggcgcgaagctgctg
aacaacgacgatcgtctggaagaggcgctgcggcgcatggtccggcagatcggcgtggtg
gagatcggtaagaaaccggaaaccaccgtcaccatatcccgcctgcaggacgaataa

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