Falsirhodobacter algicola: GR316_07360
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Entry
GR316_07360 CDS
T07373
Symbol
recQ
Name
(GenBank) DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
fap
Falsirhodobacter algicola
Pathway
fap03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
fap00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
GR316_07360 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
fap03019
]
GR316_07360 (recQ)
03400 DNA repair and recombination proteins [BR:
fap03400
]
GR316_07360 (recQ)
Enzymes [BR:
fap01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
GR316_07360 (recQ)
Messenger RNA biogenesis [BR:
fap03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
GR316_07360 (recQ)
DNA repair and recombination proteins [BR:
fap03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
GR316_07360 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HRDC
RQC
DEAD
Helicase_C
RecQ_Zn_bind
Motif
Other DBs
NCBI-ProteinID:
QUS36103
UniProt:
A0A8J8SL43
LinkDB
All DBs
Position
complement(1459220..1461256)
Genome browser
AA seq
678 aa
AA seq
DB search
MTAPATFLRDIFGFDAFRPGQEEIVAAVTAGQNTLAIMPTGGGKSLCYQLPALCRDGVTV
VISPLIALMRDQVRSLREVGVEAGALTSANTEAENEEVFEALDQGRLKLLYMAPERLGVA
EGMLRRIGVGLIAVDEAHCVSQWGHDFRPDYLRIGTLRRSLGVPLAAFTATADAETQAEI
VERLFGGETPATFLRGFDRPNIHLAFAVKDSPRRQILDWAGRRKGLSGIVYTATRAKTET
LARALEEAGHSAAHYHGGMDPEERRMVETRFQREDGLIVVATVAFGMGIDKPDIRWVAHA
DLPKTIEGYYQEIGRAGRDGAPAETLTLYGPDDIRLRRSQIDESVAPPERRAADHGRLNA
LLGLAEAMSCRRQGLLRYFGETSEPCGNCDICDRPVEVFDATEAVRKALSAILRTGEWFG
TGHLIDILTGNRTTKVAERGHDALPTFAVGRDLSKPAWGAVFRQMMGRDLVRPDPERHGA
LRMTDEALPILKGEQPITLRRDTVDKAPGRTAVKTLVSDEDAPLMSALKAKRRALAEAQN
VPAYVIFTDRTLAEMAERRPATLDDMARITGVGARKLESYGSAFLAVINGAAEPMHPQRR
RLAGRDAGLIFDRLAEAQVRLARGEDGTGKPMNLPTATLRRIAESRPSTLSDLDRIGGLG
PQKLDRFGAAFLEILHDG
NT seq
2037 nt
NT seq
+upstream
nt +downstream
nt
atgacggccccggcgaccttcctgcgcgacatcttcggcttcgatgccttccgccccggg
caggaagagatcgtggccgcggtgacggccgggcagaacacgctggccatcatgcccacg
ggcgggggcaaatcgctctgctatcagcttccggcgctgtgccgcgatggggtgacggtc
gtcatctcgccgttgatcgcgctgatgcgcgatcaggtccgatcgctccgcgaggtgggc
gtggaggcgggggcgctgacatcggccaataccgaggccgagaatgaggaagtcttcgag
gcgctggatcagggccggctgaagctgctctatatggcgcccgaacgccttggcgtggcc
gaagggatgctgcggcgcatcggcgtcggcctgatcgcggtggacgaggcgcattgcgtc
agccaatgggggcacgatttccgccccgattacctgcggatcggcacgctgcggcgcagc
ctcggcgtgccgctcgcggccttcacggccaccgccgatgccgaaacgcaggccgagatc
gtggagcggctgtttggcggcgagacgcccgccaccttcctgcgcggcttcgatcggccg
aacatccaccttgcctttgccgtgaaggacagcccgcgccgccagatcctcgattgggcg
ggccgtcgcaagggcctgtcgggcatcgtctataccgccacccgcgccaagaccgagacg
ctggcccgcgcgctggaagaggcgggacacagcgccgcccattaccatggcggcatggac
cccgaagaacggcgcatggtggaaacccgctttcagcgcgaggatggcttgatcgtcgtg
gcgacggtggccttcgggatgggcatcgacaagcccgacatccgctgggttgcccatgcc
gatctgcccaagaccatcgaaggctactatcaggagatcggccgcgcgggccgcgacggc
gccccggccgaaacgctgaccctctacggccccgacgacattcgcctgcgccgcagccag
atcgacgaaagcgtggccccgcccgaacgccgcgccgccgatcacgggcgcctcaatgcc
cttctgggccttgccgaggcgatgagctgccgccgtcagggccttctgcgctatttcggc
gaaacctccgagccgtgcggcaattgcgacatctgcgaccgccccgtcgaggtgttcgac
gcgaccgaggccgtgcgcaaggcgctctcggcgatcctgcgcacgggtgaatggttcgga
acgggccatctgatcgacatcctgaccggcaaccgcaccaccaaggtggccgaacggggg
catgacgcgctgccgacctttgccgtcgggcgcgatctgtccaaacccgcatggggcgcg
gtgttccggcagatgatggggcgcgatctggtgcgccccgatcccgaacgccatggcgcc
ctgcgcatgaccgacgaggcgctgccgatcctgaagggggagcagccgatcaccctgcgc
cgcgacacggtggacaaggcccccggccgcaccgccgtcaagacgctggtcagcgacgag
gacgcgcccctgatgtccgcgctgaaggccaagcgccgcgcgctggccgaggcgcagaac
gtccccgcctatgtgatcttcaccgaccgcaccttggccgagatggccgagcgccgcccc
gccacgctggacgacatggcgcgcatcaccggggtcggggcgcgcaagctggaaagctat
ggctcggccttccttgcggtgatcaacggcgcggccgagccgatgcacccgcagcgccgc
cgccttgcggggcgcgatgcgggcctcatcttcgaccggctggccgaggcgcaggtccgc
cttgcccgcggcgaggacgggacgggcaagccgatgaacctgcccactgcgaccctgcgc
cgcatcgccgaaagccgcccctccaccctgtccgatctggaccggatcggcgggctgggt
ccgcagaagctggaccgtttcggcgcggccttcctcgagatcctgcacgacggctga
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