Falsirhodobacter algicola: GR316_07710
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Entry
GR316_07710 CDS
T07373
Name
(GenBank) DEAD/DEAH box helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
fap
Falsirhodobacter algicola
Pathway
fap03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
fap00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
GR316_07710
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
fap03019
]
GR316_07710
03009 Ribosome biogenesis [BR:
fap03009
]
GR316_07710
Enzymes [BR:
fap01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
GR316_07710
Messenger RNA biogenesis [BR:
fap03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
GR316_07710
Ribosome biogenesis [BR:
fap03009
]
Prokaryotic type
rRNA helicases
GR316_07710
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
CMS1
Motif
Other DBs
NCBI-ProteinID:
QUS36163
UniProt:
A0A8J8SL63
LinkDB
All DBs
Position
complement(1535158..1537248)
Genome browser
AA seq
696 aa
AA seq
DB search
MTDMTQIAAPLAAALDAKGYSTLTAVQEAVIAPELAGRDALVSAQTGSGKTVAFGLAIAP
EILNGADRLLFADVPLALAIAPTRELALQVARELEWLYAEAGAVIATCVGGMDYRTEKRA
LDRGAHIVVGTPGRLRDHIERGSLDLSGLRAAVLDEADEMLDLGFRDDLEFILEAAPEDR
RTLMFSATVPREIAALAEDFQNDALRIQTAGEQKQHSDIEYRAFSVASRDKENAIFNTLR
FYESQTAIVFCKTRANVNNLMARMGNRGFQVVALSGELSQQERTHALQSLRDGRARVCIA
TDVAARGIDLPGLELVIHADLPSNSETLLHRSGRTGRAGAKGVSALIVPQAEFRKAQRLL
QGAKLVAEWGAPPSAEEVQAKDDERILTHPALVPAGDDTPLAQTLIESFGAETVAAAFVR
LWREGRSAPEVLTDVSAPPAAREPRPKGEFGESVWYSLTVGHTGRAEARWLLPKLCEAGG
ITKNDIGAIRIQQDRSFVQIAKAAAPRFGDGLTVEDGIDMARMEGEPSFERPERPRTPRG
ERPFREDRGPRPERSERPARPPRADRPAREDRPARPPREKAPYQPKPSRFVEDEAPRAER
APRAPYRRDEAPAGDAPRTKKPRWSPEDRVQREDAPRPRSAGFKTHGKDDGKPRSAGFKS
HGGGKPGAKPRAAGFKTHAPKDARDTSKRFTPPSKK
NT seq
2091 nt
NT seq
+upstream
nt +downstream
nt
atgacggatatgacacagatcgccgcgccgctggccgcggcgctggatgccaagggctat
tcgacccttactgcggtgcaagaggcggtgatcgcaccggaacttgcgggccgtgacgcg
ctggtttcggcgcagacgggttcgggcaagacggtggccttcggcctcgccatcgccccc
gagattctgaacggcgccgaccggctgctgtttgcggacgtgccgctggcgctcgccatc
gcgccgacgcgcgaactggcgctgcaggtcgcgcgcgaactcgaatggctctatgccgaa
gcgggcgcggtgatcgccacctgcgtcggcggtatggattaccggaccgagaagcgggcg
ctggaccgcggcgcgcatatcgtcgtcggcacgcccggccgtctgcgcgaccatatcgaa
cgcggatcgctggatctgtcgggcctgcgcgccgccgtcctcgacgaggccgacgagatg
ctggacctcggcttccgcgacgatctggagttcatcctcgaggcggctcccgaagatcgc
cgcacgctgatgttctcggccaccgtcccgcgcgagatcgcggcccttgccgaagatttc
cagaacgatgccctgcgcatccagacggccggcgagcagaagcagcacagcgacatcgaa
taccgcgccttctccgtcgcctcgcgcgacaaggagaatgcgatcttcaacaccctgcgc
ttctatgaatcgcagacggcgatcgtcttctgcaagacgcgtgcgaacgtgaacaacctg
atggcccgcatgggcaatcgcggtttccaagtcgtcgcgctgtcgggcgagttgagccag
caggaacgtacccacgcgcttcagtcgctgcgggacgggcgtgcccgtgtctgcatcgcg
accgacgtcgccgcgcgcgggatcgaccttccggggctggaactggtgatccatgccgac
ctgccctcgaactcggaaacgctgctgcaccgttcgggccggacgggccgggccggggcg
aagggcgtctcggcgctgatcgtgccgcaggcggagttccgcaaggcgcagcgtctgctg
caaggtgccaaactggtggccgaatggggtgcgcccccctcggccgaagaggtgcaggcc
aaggatgacgagcgcatcctgacccacccggcgctggttccggccggcgacgatacgccc
ttggcccagaccctgatcgagagcttcggcgccgagacggtcgctgcggccttcgtgcgc
ctgtggcgcgaggggcgttcggcgcccgaggttctgacggacgtgtccgcccccccggcg
gcgcgcgaaccgcgccccaagggcgagttcggcgaatcggtctggtactcgctgacggtc
ggccataccggccgggccgaagcgcgttggctgctgccgaagctgtgcgaagcgggcggc
atcaccaagaacgacatcggcgcgatccgcatccagcaggaccgcagcttcgtgcagatc
gccaaggccgcagcgccgcgctttggtgatgggctgaccgtcgaggacgggatcgacatg
gcgcggatggagggcgagccgtccttcgaacgccccgagcgtccccgcaccccgcgcggc
gagcgtccgttccgcgaagatcgcggcccgcgccccgagcgttccgagcgcccggcccgc
ccgccgcgggcagaccgccccgcgcgcgaggatcgtcccgcacgtccgccgcgcgaaaag
gcgccctatcagccgaagccctcgcgcttcgtcgaggatgaggccccgcgcgccgaacgc
gccccccgcgcgccctatcgccgtgacgaggccccggcgggcgacgcgccgcgcaccaag
aaaccgcgctggtcgcccgaagaccgcgtgcagcgcgaagatgcgccgcgtccgcgttcg
gccggattcaagacccacggcaaggatgacggcaagccgcgttcggcgggcttcaaatcc
cacggcggtggcaagccgggtgccaaacctcgggcggcgggcttcaagacccacgcgccc
aaggatgcgcgcgacacctccaagcggttcactccgcccagcaagaaatga
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