Rhodobacteraceae bacterium SC52: G5B39_00055
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Entry
G5B39_00055 CDS
T06457
Name
(GenBank) ABC transporter substrate-binding protein
KO
K02035
peptide/nickel transport system substrate-binding protein
Organism
faq
Rhodobacteraceae bacterium SC52
Pathway
faq02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
faq00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
G5B39_00055
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
faq02000
]
G5B39_00055
Transporters [BR:
faq02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
G5B39_00055
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_5
Motif
Other DBs
NCBI-ProteinID:
QIE40508
UniProt:
A0A858CJJ3
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All DBs
Position
complement(11159..12712)
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AA seq
517 aa
AA seq
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MARLSLAVALTVLVGTTTHASEFRWASTTDPQTMDPHAVNSTPVLSFLNNVYEGLVRRGK
DMTLEPSLATSWEPLENGGGWRFYLREGVTFHDGSAFTAEDVLWSYQRASSVLADTASWF
SPVAAMVAKDDYTVEILTKAPNPIFPDSIANWMIMDKGWSDANEAQYPAKDGENYATLHA
NGTGPFLLVERDPGLSTVLEPNSDWWGEAEHNLTRATFTPIQNPATAVAALLSGDIDMIN
PVPIQDAARLEQAPGVDLIRGTETRVIMLGFDQTSPELLSGAGPNPFLDERVRRAVSMAV
NVPAILQTIMRGSAEPASQLVPAGLRGYSEANAARPDLDLDGARALLAEAGYPDGFSFEL
KCTNDRYLNDASVCQAVVAMLAQIGLEVTLDAMPVRNYWTELRADNFDMYLLGWSPGTFD
AEHPLRFLAHTPVADLGTWNFGGYSNARIDALLPLIQSEIDESARQAMLDETAAILQQEV
AYVPLYVQPLLWGVRDGITVTQRPDNFFMLRWVNLAD
NT seq
1554 nt
NT seq
+upstream
nt +downstream
nt
atggcacgtctttccctcgccgttgcccttaccgttcttgtcggcactacgacgcatgcg
tctgaattccgctgggcatccacaacagaccctcagaccatggatccgcacgcggtcaat
tcgactccggtgctgagttttctgaacaacgtctatgaagggctggtgcggcgaggcaaa
gacatgacacttgagccgtcgcttgccacctcgtgggagccgcttgaaaacggcggcggc
tggcgcttttatctgcgcgaaggcgtgacattccacgacggtagcgcgttcactgccgaa
gatgtgctctggtcgtatcagcgcgcctctagcgtattggctgatacggcgagctggttc
tcgcccgtggcggccatggtcgcgaaagacgattacacggttgagattctcacgaaggca
ccgaacccgatttttccggacagcatcgccaactggatgatcatggataagggctggtcc
gacgcaaacgaggcgcaatatccggccaaagacggcgaaaactatgccacgctgcatgca
aatggcaccggtcctttcctgttggtcgaacgcgatccgggcctgagcaccgtactggag
cccaattccgactggtggggcgaggcagagcataatctgacccgtgccacgttcaccccg
atccagaacccggcaactgccgtggccgcgcttttgtcgggggatatcgacatgatcaac
ccggtgccaattcaggatgcggcgcggctggaacaagcccccggtgtggacctgatccgc
gggaccgaaacgcgtgtgatcatgcttgggtttgatcaaacctcgccagagttgttgtca
ggggccggaccaaacccatttctggatgaacgcgtgcgcagggccgtgtccatggcggtg
aatgtgcccgcgatcttgcaaacgatcatgcgcggcagtgccgagcccgcgtcgcaactg
gtgcctgcgggcctgcgcggctattctgaagccaacgcagcacggcccgaccttgatctt
gacggtgcgcgcgcgctgctggccgaagctgggtatcccgatgggttcagcttcgagctg
aagtgcacaaatgaccgctatctcaatgacgcgtcggtgtgtcaggccgtggtggcgatg
ctcgcacaaattgggctcgaagtgacgttggatgcgatgccggttcgcaattactggacc
gagttgcgggcagataatttcgacatgtatttgctgggatggtcccccggcacgttcgac
gcagagcatccgttgcgttttctagcgcacacgcctgttgctgatctgggtacttggaac
ttcgggggctattccaacgcgcgaattgatgcgttgttgccgctgatccaatcggaaatc
gatgaaagcgcacgtcaggccatgctggatgaaaccgccgcaatcctgcagcaagaggtg
gcttatgtgcctttgtacgttcagccgcttttgtggggggtgcgcgacggcatcacggtc
acccagcggccggacaactttttcatgctgcgttgggtgaacctggcggactaa
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