Rhodobacteraceae bacterium SC52: G5B39_00385
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Entry
G5B39_00385 CDS
T06457
Name
(GenBank) 3-hydroxyacyl-CoA dehydrogenase
KO
K01782
3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:
1.1.1.35
4.2.1.17
5.1.2.3
]
Organism
faq
Rhodobacteraceae bacterium SC52
Pathway
faq00071
Fatty acid degradation
faq00280
Valine, leucine and isoleucine degradation
faq00310
Lysine degradation
faq00362
Benzoate degradation
faq00380
Tryptophan metabolism
faq00410
beta-Alanine metabolism
faq00640
Propanoate metabolism
faq00650
Butanoate metabolism
faq00907
Pinene, camphor and geraniol degradation
faq00930
Caprolactam degradation
faq01100
Metabolic pathways
faq01110
Biosynthesis of secondary metabolites
faq01120
Microbial metabolism in diverse environments
faq01200
Carbon metabolism
faq01212
Fatty acid metabolism
Brite
KEGG Orthology (KO) [BR:
faq00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00640 Propanoate metabolism
G5B39_00385
00650 Butanoate metabolism
G5B39_00385
09103 Lipid metabolism
00071 Fatty acid degradation
G5B39_00385
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
G5B39_00385
00310 Lysine degradation
G5B39_00385
00380 Tryptophan metabolism
G5B39_00385
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
G5B39_00385
09109 Metabolism of terpenoids and polyketides
00907 Pinene, camphor and geraniol degradation
G5B39_00385
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
G5B39_00385
00930 Caprolactam degradation
G5B39_00385
Enzymes [BR:
faq01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.35 3-hydroxyacyl-CoA dehydrogenase
G5B39_00385
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.17 enoyl-CoA hydratase
G5B39_00385
5. Isomerases
5.1 Racemases and epimerases
5.1.2 Acting on hydroxy acids and derivatives
5.1.2.3 3-hydroxybutyryl-CoA epimerase
G5B39_00385
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Gene cluster
GFIT
Motif
Pfam:
3HCDH_N
ECH_1
3HCDH
ECH_2
DAO
NAD_binding_2
Sacchrp_dh_NADP
F420_oxidored
NAD_Gly3P_dh_N
UDPG_MGDP_dh_N
Pyr_redox_2
FAD_binding_3
MotA_ExbB
ApbA
2-Hacid_dh_C
NAD_binding_8
Asparaginase
Motif
Other DBs
NCBI-ProteinID:
QIE40566
UniProt:
A0A858CI57
LinkDB
All DBs
Position
68492..70696
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AA seq
734 aa
AA seq
DB search
MTDFTYNLDADGVATITWDVPGKSMNVMSQQGFADLDALIDRALADDACKGVVITSGKDT
FAGGMDLNIIAGMKEATAADPARGVFDGVMEIHHILRKIERAGMDPKTLKGGKPIAAALP
GTALGIGLEIPLACHRIFAADNPKAKIGLPEIQVGIFPGAGGTTRLARKLGAMAAAPFLL
EGKLSDPKKAKSAGLIDEVTDPASLLQTAKDWVLSASDKDIVKPWDAKGYKMPGGAPYHP
AGFMTFVGASAMINGKTKGVYPAAKALLSAVYEGALVPFDTALKIEARWFTTVMLNPSSG
AMIRSLFINKTALEKGANRPAVPDETVKKLGVLGAGMMGAGIAYVSAKAGIEVILIDRDQ
AAADKGRAHCEALLDKGVSRRKITAETKDAVLERITATPDFAALEGCDLVVEAVFEDPKV
KAETTAKAEAHLPETAIFATNTSTLPITELAKASRSAEQFIGIHFFSPVDKMLLVEIIRG
KHTGDRAVAKALDFVRQIRKTPIVVNDARFFYANRCILPYTNEGIRMLREGVAPALIENA
AKLVGMPLGPLQLIDEISIDLGAKIARATKAGMGDAYPDTDVDEVIFWMEDQGRMGRKAN
AGFYAYDEKGKRTGLWDGLAEEYPTAKTQPDLATVQHRLLMAQVLEAVRAFEEGVLMDIR
EGDVAGILGWGFAPWSGGPISWLDIIGAGKAVAICDGLEAVHGARFKAPGLLRELAESDD
SFYGRFGPEAKKAA
NT seq
2205 nt
NT seq
+upstream
nt +downstream
nt
atgaccgatttcacctataaccttgacgcagacggcgtggcgaccatcacgtgggacgtt
cccggcaaatccatgaatgtgatgagccagcagggctttgccgatctggacgccctgatc
gaccgggcgcttgcggacgacgcgtgcaaaggggtcgtgatcacctcgggcaaggacacc
tttgcaggcgggatggacctgaacatcatcgcgggaatgaaggaagcaactgctgccgat
ccggcgcgcggcgtcttcgacggcgtgatggaaatccaccacatcctgcgcaaaatcgaa
cgcgcgggcatggatccaaagacgctgaaaggcggaaaacccatcgccgccgccctgccc
ggcaccgcgcttgggatcgggctcgaaattccgctggcttgccaccggatctttgccgcc
gacaatcccaaggccaagatcggcctgcccgaaattcaggttggcatcttccccggtgcg
gggggcacgacacgtctggcgcgcaaactgggcgcaatggccgccgcaccctttttgttg
gaaggcaagctcagcgatcccaagaaggcaaaatcagccgggttgatcgacgaagtaact
gatccggcttcccttttacagacggccaaggattgggtgttgtcggcgagcgacaaggac
atcgtgaaaccatgggatgcaaagggctacaaaatgcccggcggcgcgccgtatcatccc
gccggtttcatgacctttgtcggcgcaagcgcaatgatcaacggcaagaccaaaggcgtc
tatccagccgccaaggcgctgctgtctgctgtttatgaaggggcgctcgtgcctttcgac
accgctctgaaaatcgaagcgcgctggtttacaaccgtgatgctgaacccctcatcgggc
gcgatgatccggtcgcttttcatcaacaagaccgcgctggaaaaaggcgcgaacaggcct
gccgtacccgacgagacggtgaagaaacttggtgttcttggggctggcatgatgggagcc
ggaatcgcctatgtgtccgccaaagccgggatcgaggtcattctgatcgaccgtgatcaa
gccgctgccgacaaggggcgtgcgcattgcgaagccttgctcgacaagggcgtaagccgc
cgcaagatcactgctgaaacgaaagatgcggttctggaacgcattaccgcgacccctgat
ttcgccgcccttgaaggctgcgatctggtggtcgaagccgtgttcgaagacccaaaggta
aaggcggaaaccaccgccaaagccgaagcacacctgcccgaaacagcgatcttcgccacc
aacacgtccaccctgcccatcaccgaactggccaaagccagccggtcggcagagcagttc
atcggcatccacttcttcagcccggtggacaagatgctgctggtcgagatcattcgcggc
aaacacacgggcgaccgtgccgtggccaaagcgctcgatttcgtgcgccagatccgcaag
acgccgattgtggtcaacgacgcgcggttcttctacgccaaccgctgtatcctgccctac
accaacgaaggcatccgcatgctgcgcgaaggggtcgcccccgcattgatcgaaaacgcc
gccaagctggttggcatgccgcttggtccgctgcaattgattgacgagataagcattgat
ctgggggcaaagattgcccgcgcaaccaaggcggggatgggggacgcgtaccctgataca
gatgtcgatgaggtgatcttttggatggaagatcaaggccgtatgggccgcaaagccaat
gcagggttctatgcctatgacgaaaagggcaagcgcactggtctttgggacgggctcgcc
gaagagtatcctacggcaaaaacacagcctgacctcgcaacagtgcaacaccggctcttg
atggcgcaagtgctggaagcggtccgtgcctttgaagaaggggtgctgatggacatccgc
gaaggcgacgtggcaggcatcttgggctggggctttgcgccttggtccggcggtccgatc
agttggctggacatcatcggcgcaggcaaggcggtcgcaatctgcgacggactggaagca
gtgcacggcgcacgcttcaaagcgcccggcctgctgcgcgagttggcggaaagtgatgac
agcttttacggtcggtttgggccagaggccaaaaaagcagcctag
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