KEGG   Rhodobacteraceae bacterium SC52: G5B39_01190
Entry
G5B39_01190       CDS       T06457                                 
Symbol
lysA
Name
(GenBank) diaminopimelate decarboxylase
  KO
K01586  diaminopimelate decarboxylase [EC:4.1.1.20]
Organism
faq  Rhodobacteraceae bacterium SC52
Pathway
faq00300  Lysine biosynthesis
faq00470  D-Amino acid metabolism
faq01100  Metabolic pathways
faq01110  Biosynthesis of secondary metabolites
faq01120  Microbial metabolism in diverse environments
faq01230  Biosynthesis of amino acids
Module
faq_M00016  Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:faq00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00300 Lysine biosynthesis
    G5B39_01190 (lysA)
  09106 Metabolism of other amino acids
   00470 D-Amino acid metabolism
    G5B39_01190 (lysA)
Enzymes [BR:faq01000]
 4. Lyases
  4.1  Carbon-carbon lyases
   4.1.1  Carboxy-lyases
    4.1.1.20  diaminopimelate decarboxylase
     G5B39_01190 (lysA)
SSDB
Motif
Pfam: Orn_Arg_deC_N Orn_DAP_Arg_deC Ala_racemase_N
Other DBs
NCBI-ProteinID: QIE40702
LinkDB
Position
complement(233713..234993)
AA seq 426 aa
MDHFLYRNGVLHAEDVPLAEIAAQVGTPFYCYSAATLLRHYRLFDEALDGMDHLVCFAMK
SNSNQAILRLLGDAGAGMDVVSGGEYARARAAGIPGERIVFSGVGKTRLEMRTALEGGIR
QFNVESEPELERLSEVASSLGLTAPITLRVNPDVDAKTHAKIATGKSENKFGIPIARARE
VYALAGRLPGIDVIGIDVHIGSQLTDLEPFEAAYRKVAELTRVLREDGHNIRRLDLGGGL
GIPYTRSNEAPPLPREYGALIQRTVGDLGCEIEIEPGRLISGNAGVLVSEVVYLKSGEGR
EFLILDAAMNDLVRPSMYDAHHDIVPLVEPEPGAAQRPFDVVGPVCETGDTFARGRDMAA
LGEGDLVAFRSAGAYGAVMASEYNSRPLVPEVLVQGDQWAVIRPRPSIEEMIARDTVPDW
LGAELD
NT seq 1281 nt   +upstreamnt  +downstreamnt
atggaccattttctataccgcaacggcgtgctgcatgctgaggacgtgccgttggccgag
attgcagctcaggtgggcaccccgttctattgctattcggcggccacgttgctgcgccac
tatcgtctgttcgacgaagcgctggacgggatggatcatcttgtgtgctttgccatgaag
tcgaattccaatcaggccattttgcgcctgttgggcgatgcgggcgcgggcatggatgtg
gtgtccggcggcgaatatgcgcgggcgcgtgctgctggcattccgggcgaacggatcgtg
ttttccggcgtcggcaagacccggcttgagatgcgcaccgcgttggaaggcgggattcgg
cagttcaacgtcgaatcagagccagagcttgaacgcttgtccgaagttgccagcagtctt
ggcctgacagcgccgatcaccttgcgggtcaaccccgatgtggatgccaagacccacgcg
aaaattgcaacgggcaaatccgagaataaattcggcatcccgattgcacgtgcgcgcgag
gtgtatgccttggctgggcgcctgccggggatcgatgtgattgggatcgacgtgcatatc
ggcagccaactgacagatttggaaccgttcgaagccgcgtatcggaaggtggctgaattg
acccgcgtcctgcgcgaagatgggcacaacattcgccgcctcgatctggggggtggactt
gggattccttacacgcggtcgaacgaagctccgccattgccacgtgaatacggcgcgctg
attcagcggacggttggcgatctggggtgtgagatcgagattgagccgggccgcttgatt
tccggcaatgccggggtgttggtgtcagaggtggtgtatctgaaatcgggcgaggggcgt
gaatttctgattctggatgccgccatgaatgatttggtgcgtccgtcgatgtacgatgcg
caccatgacattgtcccgctggtcgagcctgaacccggcgcggcacagcgcccctttgat
gtggtcgggccggtctgcgagacgggcgacacctttgcgcgggggcgcgacatggccgcc
cttggtgagggggatcttgtcgcctttcgctccgccggagcgtacggggctgttatggcc
tccgagtataactcgcgcccgctggtgcccgaagtgcttgtgcagggggatcagtgggca
gtgatccggccgcggcccagcatcgaagagatgatcgcgcgggatacggtgccggattgg
ctgggcgctgaactggactag

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