Rhodobacteraceae bacterium SC52: G5B39_01190
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Entry
G5B39_01190 CDS
T06457
Symbol
lysA
Name
(GenBank) diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
faq
Rhodobacteraceae bacterium SC52
Pathway
faq00300
Lysine biosynthesis
faq00470
D-Amino acid metabolism
faq01100
Metabolic pathways
faq01110
Biosynthesis of secondary metabolites
faq01120
Microbial metabolism in diverse environments
faq01230
Biosynthesis of amino acids
Module
faq_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
faq00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
G5B39_01190 (lysA)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
G5B39_01190 (lysA)
Enzymes [BR:
faq01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
G5B39_01190 (lysA)
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Paralog
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GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
Motif
Other DBs
NCBI-ProteinID:
QIE40702
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All DBs
Position
complement(233713..234993)
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AA seq
426 aa
AA seq
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MDHFLYRNGVLHAEDVPLAEIAAQVGTPFYCYSAATLLRHYRLFDEALDGMDHLVCFAMK
SNSNQAILRLLGDAGAGMDVVSGGEYARARAAGIPGERIVFSGVGKTRLEMRTALEGGIR
QFNVESEPELERLSEVASSLGLTAPITLRVNPDVDAKTHAKIATGKSENKFGIPIARARE
VYALAGRLPGIDVIGIDVHIGSQLTDLEPFEAAYRKVAELTRVLREDGHNIRRLDLGGGL
GIPYTRSNEAPPLPREYGALIQRTVGDLGCEIEIEPGRLISGNAGVLVSEVVYLKSGEGR
EFLILDAAMNDLVRPSMYDAHHDIVPLVEPEPGAAQRPFDVVGPVCETGDTFARGRDMAA
LGEGDLVAFRSAGAYGAVMASEYNSRPLVPEVLVQGDQWAVIRPRPSIEEMIARDTVPDW
LGAELD
NT seq
1281 nt
NT seq
+upstream
nt +downstream
nt
atggaccattttctataccgcaacggcgtgctgcatgctgaggacgtgccgttggccgag
attgcagctcaggtgggcaccccgttctattgctattcggcggccacgttgctgcgccac
tatcgtctgttcgacgaagcgctggacgggatggatcatcttgtgtgctttgccatgaag
tcgaattccaatcaggccattttgcgcctgttgggcgatgcgggcgcgggcatggatgtg
gtgtccggcggcgaatatgcgcgggcgcgtgctgctggcattccgggcgaacggatcgtg
ttttccggcgtcggcaagacccggcttgagatgcgcaccgcgttggaaggcgggattcgg
cagttcaacgtcgaatcagagccagagcttgaacgcttgtccgaagttgccagcagtctt
ggcctgacagcgccgatcaccttgcgggtcaaccccgatgtggatgccaagacccacgcg
aaaattgcaacgggcaaatccgagaataaattcggcatcccgattgcacgtgcgcgcgag
gtgtatgccttggctgggcgcctgccggggatcgatgtgattgggatcgacgtgcatatc
ggcagccaactgacagatttggaaccgttcgaagccgcgtatcggaaggtggctgaattg
acccgcgtcctgcgcgaagatgggcacaacattcgccgcctcgatctggggggtggactt
gggattccttacacgcggtcgaacgaagctccgccattgccacgtgaatacggcgcgctg
attcagcggacggttggcgatctggggtgtgagatcgagattgagccgggccgcttgatt
tccggcaatgccggggtgttggtgtcagaggtggtgtatctgaaatcgggcgaggggcgt
gaatttctgattctggatgccgccatgaatgatttggtgcgtccgtcgatgtacgatgcg
caccatgacattgtcccgctggtcgagcctgaacccggcgcggcacagcgcccctttgat
gtggtcgggccggtctgcgagacgggcgacacctttgcgcgggggcgcgacatggccgcc
cttggtgagggggatcttgtcgcctttcgctccgccggagcgtacggggctgttatggcc
tccgagtataactcgcgcccgctggtgcccgaagtgcttgtgcagggggatcagtgggca
gtgatccggccgcggcccagcatcgaagagatgatcgcgcgggatacggtgccggattgg
ctgggcgctgaactggactag
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