Rhodobacteraceae bacterium SC52: G5B39_01485
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Entry
G5B39_01485 CDS
T06457
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
faq
Rhodobacteraceae bacterium SC52
Pathway
faq03030
DNA replication
faq03410
Base excision repair
faq03420
Nucleotide excision repair
faq03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
faq00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
G5B39_01485 (polA)
03410 Base excision repair
G5B39_01485 (polA)
03420 Nucleotide excision repair
G5B39_01485 (polA)
03440 Homologous recombination
G5B39_01485 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
faq03032
]
G5B39_01485 (polA)
03400 DNA repair and recombination proteins [BR:
faq03400
]
G5B39_01485 (polA)
Enzymes [BR:
faq01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
G5B39_01485 (polA)
DNA replication proteins [BR:
faq03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
G5B39_01485 (polA)
DNA repair and recombination proteins [BR:
faq03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
G5B39_01485 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
G5B39_01485 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
Motif
Other DBs
NCBI-ProteinID:
QIE40750
UniProt:
A0A858CI40
LinkDB
All DBs
Position
complement(297905..300691)
Genome browser
AA seq
928 aa
AA seq
DB search
MAFGKGHHLHLIDGSAFIFRAYHALPPLTRKSDGLPVGAVSGFCNMLLRYIDGNDGPDAP
THAAVIFDKGSHTFRNDLYDQYKANRDAMPEDLRPQIPLTRDATRAFNVACEELEGFEAD
DIIATLSCQAREAGGRVTIISSDKDLMQLVGGGVEMLDAMKNLRIDVEGVEAKFGVGPDR
VVDVQALAGDSVDNVPGAPGIGIKTAALLINEYGDLDTLLERAGEIKQPKRRQTLIDHAD
QIRLSRELVRLDTSMTLPFTLDDLEVRDPDAETLLAFLSEMEFRTLTKRVSDRMGVAAPA
VPEPAAPQVEAEVVPFDPDKYEVVRDAAALQVWIDRIVDRGWVAVDTETTGLDDMRADLV
GVSLAVEIGRACYIPLRHKAADRDDLFGSDDLAEGQMDFDTCIEMLKPVLEDPSILKIGQ
NMKYDAKILWRFGINVAPIDDTMLISYSQHAGLHGHGMDTLSERYLDHAPIPIKPLLGSG
KSAITFDRVPLEKAAPYAAEDADITLRLWHALKPRLHTAKVTTVYETMERPLVPVLAGME
RAGIKVNRQTLSRMSSAFAQKMAGLEAEIHELAGETFNVGSPKQLGEILFDKMGLTGGKK
GKTGAYATGADVLEDLATEHDLPARVLDWRQLSKLKSTYTDALQDHINPDTGRVHTSYSI
AGAATGRLASTDPNLQNIPIRSEEGRRIRQAFVAEEGKVLLALDYSQIELRILAHIAGIE
ELKQAFREGQDIHALTASEMFNVPLDEMTPDVRRQAKAINFGVIYGISGFGLARNLRIPR
AEAQGFIDRYFERFPGIKDYMADTTAFAKEHGFVQTLFGRKIHTPEISASGPRAGFAKRA
AINAPIQGTAADVIRRAMIRMPDAIADLPATMLLQVHDELLFEVDAEAVDTVTQRVREIM
ENASMPAVNLTVPLTVDAGSGSNWSDAH
NT seq
2787 nt
NT seq
+upstream
nt +downstream
nt
atggcattcggcaagggacaccaccttcatcttatcgacgggtcggcctttattttcagg
gcctatcacgcgctgccgccgcttacgcgaaagtccgacgggctgcccgtcggggcggtc
tcgggcttttgcaatatgctactgcgctacatcgacggcaacgacgggccggatgcgccc
acccatgcggcggtgatctttgacaagggcagccacacgtttcgcaatgacctttacgat
cagtacaaggctaaccgcgatgcgatgcccgaagatcttcgcccgcagattcccctgaca
cgggatgcaacccgtgcctttaatgtggcctgcgaggaactggaagggttcgaggcggac
gatatcatcgcgaccctgtcgtgtcaggcgcgcgaagcaggcgggcgtgtcacgatcatc
agttcagacaaggatttgatgcagcttgttggcgggggcgtcgagatgctggatgcaatg
aagaacctgcgcattgatgtggaaggggttgaagccaagtttggcgttggtcctgaccgt
gttgttgacgtccaagcattggccggcgacagcgtcgataatgtgcccggcgcacccggt
atcggcatcaagacggccgcgctgttgatcaatgaatatggcgatctcgatacgctgttg
gaacgtgctggcgaaatcaaacagccaaagcgtcggcagaccctgattgatcatgctgac
cagatccgcctttcgcgtgaattggtgcggctggatacgtcgatgacgctgcctttcacg
ctggatgatctggaagtgcgcgacccggacgcagaaaccctgctcgcatttttgtccgaa
atggaattccggaccctgaccaagcgggtcagtgaccggatgggggttgccgccccggct
gtgcctgaaccggctgcgccgcaggtcgaggcagaggtggtcccatttgatcccgacaaa
tacgaggtggtccgcgatgcggctgcgttgcaggtatggattgaccggatcgtggatcgt
ggttgggtcgcggtggataccgaaaccactgggctggacgatatgcgcgctgatttggtg
ggcgtcagccttgccgttgaaattggacgcgcctgctacatcccgctgcgccacaaggcc
gccgacagggatgatctgtttggctccgacgatttggctgaagggcagatggatttcgac
acgtgtatcgagatgctcaaacccgttctggaagacccctcgattctgaaaatcggccaa
aacatgaagtatgacgccaagatcctgtggcgttttggcataaatgtggcgccaatcgac
gacacgatgttgatctcttattcgcagcatgccgggttgcacgggcacgggatggatacg
ctgagcgagcgctatctggatcacgcgccgatcccgatcaaaccgcttctggggtctggc
aagtctgcgatcacctttgatcgtgtaccgcttgagaaagctgcgccctatgcggccgag
gatgccgatatcacgctacgcctgtggcatgcgttgaagccgcgtcttcacactgccaaa
gtgaccaccgtttatgagacgatggagcgcccgctggtccctgttctggctggcatggaa
cgcgcgggcatcaaggtgaatcgccagacgctgagccgcatgtcttcggcctttgcgcag
aagatggccgggctagaggctgaaattcacgaacttgcaggtgagactttcaacgtcggt
agcccgaagcaattgggagaaattctgttcgacaagatgggtttgaccggtggcaaaaaa
ggcaagacgggcgcgtatgccacaggtgccgatgtgctggaagatctggccaccgaacac
gacttgcccgcccgcgtgctggattggcggcaactgtcaaagctgaaatcgacctatacc
gacgcacttcaggaccatatcaacccagacaccgggcgagtgcacaccagctattcgatt
gccggggcggcgaccgggcggctggcatcgactgaccccaacctgcaaaatatcccgatc
cggtccgaagaggggcggcgcattcgacaggcgtttgttgccgaagagggcaaggtgttg
ctcgcgctggattacagccagatcgagttgcggattttggcgcatatcgccgggatcgaa
gagttgaagcaggcgtttcgtgaagggcaggatattcacgcgctgaccgcctccgagatg
ttcaacgtcccgctggacgaaatgacgccggatgtgcgccgtcaggccaaggcgatcaat
ttcggggtcatttatgggatttccggctttgggctggcgcgaaacctacgcattccgcgc
gccgaagcgcagggattcattgaccgctatttcgaacggtttcccggcatcaaggattac
atggccgacacgacggcctttgccaaggaacacggttttgtgcagacgttgtttggccgc
aaaatccacacacccgagatttctgccagtggcccgcgggctggctttgccaaacgcgcg
gcgataaatgcgccgattcaaggtacggcggctgatgtgatccggcgggcaatgatccgt
atgccggacgccatagcagatcttccggcgaccatgcttctacaggtgcacgacgaactg
ttgttcgaggtggatgcagaggcggttgatacagtcacgcaacgcgtgcgcgagatcatg
gaaaacgcatcaatgcccgcagtcaatctgaccgtcccgctgacggtagacgctggatcc
ggttcgaactggagcgacgctcattga
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