Rhodobacteraceae bacterium SC52: G5B39_02315
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Entry
G5B39_02315 CDS
T06457
Symbol
gyrB
Name
(GenBank) DNA topoisomerase (ATP-hydrolyzing) subunit B
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
faq
Rhodobacteraceae bacterium SC52
Brite
KEGG Orthology (KO) [BR:
faq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
faq03032
]
G5B39_02315 (gyrB)
03400 DNA repair and recombination proteins [BR:
faq03400
]
G5B39_02315 (gyrB)
Enzymes [BR:
faq01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
G5B39_02315 (gyrB)
DNA replication proteins [BR:
faq03032
]
Prokaryotic type
DNA Topoisomerases
G5B39_02315 (gyrB)
DNA repair and recombination proteins [BR:
faq03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
G5B39_02315 (gyrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_gyraseB
DNA_gyraseB_C
HATPase_c
Toprim
GyrB_insert
GyrB_hook
HATPase_c_3
Motif
Other DBs
NCBI-ProteinID:
QIE40894
UniProt:
A0A858CIR9
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All DBs
Position
468290..470707
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AA seq
805 aa
AA seq
DB search
MANTITAPEEYGADSIKVLKGLEAVRKRPGMYIGDTDDGSGLHHMVYEVVDNGIDEALAG
HADAVNVTLHDDNSVSVSDNGRGIPVGIHEGEGVSAAEVIMTQLHAGGKFDQNSYKVSGG
LHGVGVSVVNALSDWLELRIWRDGKEHCARFERGETVEHLRVIGDTPGRTGTEVRFLASN
TTFTNTEYSFKTLENRLRELAFLNSGVRIILTDERSAETQRSELYYEGGVKEFVRYLDRS
KSSMMPEPIFITGERDGITVEVAMWWNDSYNEMVLPFTNNIPQRDGGTHLAGFRGALTRT
LNIYAGQSGIARKEKVTFTGDDAREGLTCVLSVKVPDPKFSSQTKDKLVSSEVRPAVEGL
VNEKLSEWFEENPNEARLVVTKIMEAALAREAARRARELTRKKSALDIASLPGKLADCQA
RDPESRELFLVEGDSAGGSAKQGRARANQAVLPLRGKILNVERARFDRMLGSQEIGTLIT
ALGTGIGRDEFDISKLRYHKIVIMTDADVDGAHIRTLLLTFFFRQMPQIIEGGFLYIAQP
PLFKVARGKSEVYLKDQLALEDYLIEMGIDGATLRLGTGEEIVGQDLRRVVEEARTVRRT
LDNFPTHYTPRILEQAAIAGAFEPGQIDKDLQGTADAVAARLDLISAEYERGWEGRPTQD
HGIRLMRAVRGVDEVRVLDGPILRGGEARKLGSMTGALQDLYAQPATLLRRDKGLPVSGP
LDLLEAVLKEGEKGLTLQRYKGLGEMNPSQLWETTLDPEARTLLQVKVEDVAEADDIFTK
LMGDVVEPRREFIQSNALSVANLDF
NT seq
2418 nt
NT seq
+upstream
nt +downstream
nt
atggccaatacgatcacggcacccgaagaatatggcgccgattccatcaaggttctcaag
gggctggaggccgtgcgcaagcgcccgggcatgtatatcggtgacaccgatgacggctct
ggcctgcatcacatggtctacgaggtcgtggacaatgggatcgatgaagccttggccggc
cacgccgacgcggtcaacgtcacattgcacgacgacaactcggtttctgtgagcgataac
ggccgcggtattcccgttggcatccacgaaggcgaaggcgtgagcgcggcagaagtcatc
atgacccaacttcatgccggcggtaaatttgaccagaactcctataaggtttccggcggt
ttgcacggcgttggcgtgtcagtcgtcaacgctttgtcagactggctcgagctgcgcatc
tggcgggacggcaaggaacactgcgcccggttcgaacgcggcgaaacggtggaacatctg
cgcgtcattggcgacacaccgggccgcaccggaacagaagtccgtttccttgcctccaac
accacgttcaccaacacggaatacagcttcaagacccttgaaaatcgcctaagggaactg
gcgttcttgaactctggcgtgcgcatcatcctcaccgatgagcgcagcgcggaaacacag
cggtccgaattgtactacgaaggcggcgtgaaggaattcgtgcgctatctggaccgctct
aaatccagcatgatgcccgagccgatcttcatcaccggcgaacgcgacgggatcacagtc
gaagtcgccatgtggtggaatgacagttacaacgaaatggttctgccgttcaccaacaac
attccgcaacgcgacggcggcacgcacttggccggcttcaggggggcgctcacgcggacc
ttgaacatctatgcggggcagtcagggattgcccgcaaggaaaaggtcacgttcaccggg
gacgacgcccgcgaagggctgacctgcgtgctgtcagtcaaagtaccagacccgaaattc
tccagccaaaccaaggataagcttgtcagttcagaagtgcgccccgccgttgagggcctt
gtgaacgaaaagctgtcagagtggtttgaggaaaaccccaacgaagcccgtcttgttgtg
acaaagatcatggaggccgctctcgcccgcgaagcggcgcgccgcgcgcgcgaactgacc
cgcaagaaatctgcgctcgacatcgcgtcgctgcccggaaaactcgccgattgtcaggcc
cgcgacccggaaagtcgcgaattgttcctggtggagggtgacagcgccgggggctctgca
aagcagggccgtgcccgtgccaaccaagccgttctgcccctgcgcggtaaaatccttaac
gtggaacgtgcacggtttgatcgcatgctcggcagccaggaaatcgggaccttgatcacc
gctcttggcaccgggatcggacgcgacgaattcgacatttccaagctgcgctaccacaag
atcgttattatgacggatgcggatgtggatggcgcacacattcgaacgcttctgctcacc
ttcttcttccggcagatgccgcagatcatcgaaggtggtttcctctacatcgcgcaaccg
ccgctgttcaaagtcgcgcgtggcaaatcagaagtgtatttgaaggaccaactggcactg
gaagattacctgatcgagatgggtattgatggtgccaccctaaggcttggaactggcgaa
gaaattgtcgggcaagacttgcgccgcgtcgttgaagaggcgcgcactgtgcgccggaca
ctcgataactttccaacccactacaccccacgaatcctggaacaggcagcgattgctggc
gcattcgagcccggccagatcgacaaagacctgcaaggcaccgcagatgcagtagccgcg
cgactcgacctgatttcggcagagtatgaacgcggctgggaaggtcgcccgacgcaagac
catggaattcgccttatgcgcgccgtgcgcggtgtcgacgaagtgcgtgttctggacgga
ccgatcctgcgcggcggcgaagcccgtaaactcggatcaatgacaggcgcgcttcaggat
ctctatgcccaacccgcgacactgctgagacgcgacaagggtctgcctgtgtcaggcccc
ttggaccttctggaagccgtgctgaaggaaggggaaaaggggctgactctgcaacgctat
aagggtttgggcgaaatgaaccccagccaattgtgggaaacgaccctggacccggaagcc
cgcacgttacttcaggtgaaagtcgaagatgtggccgaagctgatgacatcttcaccaaa
ttgatgggggatgttgttgaaccgcgccgcgagttcatccagtccaacgcgcttagtgtc
gccaacctcgatttctag
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