Rhodobacteraceae bacterium SC52: G5B39_02675
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Entry
G5B39_02675 CDS
T06457
Symbol
dxs
Name
(GenBank) 1-deoxy-D-xylulose-5-phosphate synthase
KO
K01662
1-deoxy-D-xylulose-5-phosphate synthase [EC:
2.2.1.7
]
Organism
faq
Rhodobacteraceae bacterium SC52
Pathway
faq00730
Thiamine metabolism
faq00900
Terpenoid backbone biosynthesis
faq01100
Metabolic pathways
faq01110
Biosynthesis of secondary metabolites
Module
faq_M00096
C5 isoprenoid biosynthesis, non-mevalonate pathway
Brite
KEGG Orthology (KO) [BR:
faq00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00730 Thiamine metabolism
G5B39_02675 (dxs)
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
G5B39_02675 (dxs)
Enzymes [BR:
faq01000
]
2. Transferases
2.2 Transferring aldehyde or ketonic groups
2.2.1 Transketolases and transaldolases
2.2.1.7 1-deoxy-D-xylulose-5-phosphate synthase
G5B39_02675 (dxs)
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Motif
Pfam:
DXP_synthase_N
Transket_pyr
Transketolase_C
Transketolase_N
E1_dh
Motif
Other DBs
NCBI-ProteinID:
QIE40959
UniProt:
A0A858CIR5
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All DBs
Position
complement(544076..546004)
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AA seq
642 aa
AA seq
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MTDRPNTPLLDQINTPADMKRLSDAQLSQVADELRAETISAVSVTGGHLGAGLGVVELTV
ALHAVFDTPRDKVIWDVGHQCYPHKILTGRRDRIRTLRQKGGLSGFTKRAESPYDPFGAA
HSSTSISAALGFSVARDLGGAPPEGLGDAIAVIGDGAMSAGMAFEALNNAGHLKRRLIVI
LNDNEMSIAPPVGALSSYLSRLYAGAPFQEFKSAAKGAVSLLPPPFQEGARRAKDMLKHL
TVGGTMFEELGFSYLGPIDGHDMDQLLPVLRTVKERATGPILIHAITRKGKGYAPAEDRA
DKGHATAKFDVVTGAQKKAPSNAPSYTRVFADALLAEAAADDRIAAVTAAMPDGTGLNLF
AERYPSRCFDVGIAEQHGVTFAAGLAAGGLKPFCAMYSTFLQRGYDQVVHDVAIQRLPVR
FAIDRAGLVGADGPTHAGAFDIAFLANLPGFVVMAAADEAELTHMVATAAAYDDGPSAFR
FPRGEGVGVEMPERGVPLEIGKGRMIRQGKGVAILSFGARLSEVEKAAEALAARGITPTV
ADARFAKPLDRDLILQLAADHEALITVEEGAIGGFGSHVAQLLADEGVFDRGLKYRSMVF
PDIFIDQAGPADMYAVAGMNAEDIEAKVLDVLGVERLGAARG
NT seq
1929 nt
NT seq
+upstream
nt +downstream
nt
atgacagaccgacccaatacgcccctgttggaccagatcaacacacccgccgatatgaag
cggttatctgatgcacagctgagccaggtcgcagacgaactgcgcgctgagacgatcagt
gccgtttccgtcactggcgggcacctgggtgcggggttgggcgtggtcgaattgactgtc
gctttgcacgccgtgttcgacaccccccgcgacaaggtgatctgggatgtggggcaccaa
tgctaccctcacaagatcctgacgggtcgccgtgaccgtatccgcaccctgcgccaaaag
ggcgggctgtccgggttcaccaaacgagccgagtcgccctacgatccgtttggcgcggcg
cattcgtcgacgtcaatttctgcggcgcttggattttctgtggcgcgggacttgggcggc
gcaccgcccgagggacttggcgatgcaatcgcggtgattggcgatggcgccatgtcagcg
ggcatggcgtttgaggcgctgaacaacgcgggtcatctgaagcgccgtttgatcgtaatc
ctgaacgacaatgaaatgtcgattgcgccgccggttggggcgctgtcctcgtacctttcg
cggctttatgccggtgcgccgttccaagagttcaaatcagccgccaaaggtgcggtcagt
cttctgccgcctccgtttcaagaaggcgcgcgccgggccaaggacatgctcaagcatctg
accgtcggcggcacgatgttcgaagagttgggcttttcctatcttggcccgatcgacggg
catgacatggaccaactcttgccggttttgcgcaccgtcaaggaaagggccacaggccca
atcctgatccacgccattacccgtaagggcaaagggtatgctcccgccgaggaccgcgcc
gacaaggggcatgcgaccgccaagtttgatgtcgtcacaggcgcgcaaaaaaaggcaccg
tccaacgcgcctagttatacacgcgtttttgctgatgcattgctggccgaagctgccgct
gatgaccggattgccgccgtgactgcggccatgccggatggcaccggcctgaacctgttt
gccgaacgctatccgtctcgttgctttgatgtgggcattgcggagcagcatggtgtgacc
tttgccgctggtttggcggcgggtgggctgaaacctttctgcgccatgtactccaccttc
ctgcagcgcggctatgatcaggtggtgcacgatgttgccattcaacgcctgcccgtgcgg
tttgcaatcgaccgggctggtcttgtgggggccgatggcccgacccatgccggtgcgttc
gacatcgcgtttcttgcgaacctgccggggtttgtcgtcatggctgcggctgacgaagct
gaactgacccacatggtggccaccgcagcggcctatgatgatgggccaagcgccttccgg
tttccgcggggcgaaggtgtcggcgtcgaaatgccagaacgcggcgtgccattggaaatt
ggcaagggccggatgatccggcagggtaagggcgttgcgatcctgtctttcggcgcgcgc
ttgtccgaagttgaaaaggcggcagaggcgcttgcggcacggggcatcaccccgactgtg
gctgatgcgcgctttgccaagccgctggaccgtgacctgatcttgcagcttgccgccgat
cacgaagcgctgatcaccgtggaagagggcgcaatcggcggttttggcagccatgtcgcg
caacttttggcggatgaaggcgtgtttgatcggggcctgaaataccgttccatggtcttt
cctgacatattcatcgaccaagctggccccgccgacatgtacgcggttgcaggcatgaac
gccgaagatatcgaagccaaagtgctggatgtgctgggcgtggaacgcctcggcgcggcg
aggggttag
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