Rhodobacteraceae bacterium SC52: G5B39_02865
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Entry
G5B39_02865 CDS
T06457
Symbol
addB
Name
(GenBank) double-strand break repair protein AddB
KO
K16899
ATP-dependent helicase/nuclease subunit B [EC:
5.6.2.4
3.1.-.-]
Organism
faq
Rhodobacteraceae bacterium SC52
Brite
KEGG Orthology (KO) [BR:
faq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
faq03400
]
G5B39_02865 (addB)
Enzymes [BR:
faq01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
G5B39_02865 (addB)
DNA repair and recombination proteins [BR:
faq03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
G5B39_02865 (addB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDDEXK_1
Motif
Other DBs
NCBI-ProteinID:
QIE40992
UniProt:
A0A858CJ61
LinkDB
All DBs
Position
584060..587038
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AA seq
992 aa
AA seq
DB search
MTPRPTINLGGLFAVPPGVDFPRALVDGLVQRFAGAPPEALARTTVYVNTRRMERRILDL
FSEGPARLLPRLRLITDIGRETIESLPPVVPALRRKLELARLIEALIDAEPDLAPRDAAF
DLASSLAALMDEMQGEGVSLSDIDALDVSDLSGHWARSQKFLSLVGQFIAPDPNAPTDPE
ARQRRMVELLLARWQDTPPANPVIVAGSTGSRGATAMFMQAVAHLPNGAVVLPGVDAHIP
NDVWSGLTADPPQEDHPQYRFAVLAKKLGTDPARIPIWGGPDAPSPSRNALVSLAMRPAP
VTDSWRRDGPSLGDLPDATQGLCLIEAADPRYEAMAIALRLRAALEDGQTAALITPDRML
TRRVAATLDRWGIEPDDSAGQPLRQTAVGRLVRHVAALFGQKLTAEALIVLLKHPMVHAG
TGRNQHLKWVRELERRLRRYGPPFPDAAALATWAEGNRRKGDAGPDPRPWAEWVAETCLG
HENPADGGQTRVPLLDMTNRLLATVEALAIGADGDHTALKVWDDPDGKAAHKALGELLNE
APCAAPVTSSAFRALLDSIMGGEVREPITPDPRVMIWGTLEARVQGADLVILGSLNDGSW
PEMPAPDPWLNRRMRKEADLLLPERRIGLSAHDFQQAIAAPDVVLSRARRDGEAETVPSR
WLNRIVNLLGGLTAQRGPEALAEMRERGAHWTRLAHAMDRPATAAQPASRPSPQPPVAHR
PRSLPVTDVETLVRDPYAIYAKRILKLRGLDPLHRDPDARDRGRVLHLVMERFVPEFSSI
APEDRRARLLAVAQDVLVEEVPWPTARRLWMARLAKVADIFLADELARHAVALPLKGEQL
GTLKLTAPDFTLTAKADRIDLTDDGRYVIYDYKTGAPPTESRQKVFAKQLLLEAVIAEQA
GFGTQPAAHVLRAEYIGLGSTPKNVAAPLDKMPPDTTLAEFRKLVAEYDDPATGYTAQTA
PESEAFDGDYLLLARAGEWDLSDSPKPEKVGQ
NT seq
2979 nt
NT seq
+upstream
nt +downstream
nt
atgacgccccggccgacaatcaatctgggtgggctgttcgcagtgccgcccggtgtggat
tttccacgcgctctggtcgacggattggtccagcgatttgcaggcgcaccgcccgaagcg
ctggcgcgcacaactgtttacgtcaacacacgcaggatggaacggcgcattcttgacctg
ttctcagaggggcctgcgcgcctgctcccccggcttcgtttgattaccgatatcggccga
gagacaattgaatcccttccgccggtggttcccgccctgcggcgcaagttggaacttgcc
cggctgatcgaggcgttgatcgatgcggaacccgaccttgccccccgcgatgcggccttt
gatctggcatccagtctcgccgcgctgatggacgaaatgcagggcgaaggcgtctcgctt
tcggatattgatgcgctggacgtatcagacctgtcaggccattgggcgcgaagtcagaaa
ttcctgtcactggtcggccagtttatcgcccccgaccccaatgccccaaccgatccggaa
gcgcggcagcgccggatggtggaactgctgctcgcccgctggcaagacacgccgccggcc
aaccccgtgattgttgccgggtccaccgggtcgcgtggcgcgacggccatgttcatgcag
gcagtggcgcacctgcccaacggcgcagttgtcttgcccggcgttgatgcgcacatacca
aacgatgtttggtctggcctgacagccgatccaccgcaagaagatcacccgcaataccgc
tttgccgtgctggcaaaaaagttgggcacagatcctgcacggattcccatatggggcggg
cctgacgcgcctagcccatcgcgaaatgcgcttgtttcgctcgcaatgcggccggccccg
gttaccgatagctggcgccgcgacgggccatcgctgggcgatttacctgatgccacgcag
gggctgtgcctgatcgaggccgctgatccaaggtacgaagccatggcaatcgcgcttcgt
ttgcgggccgcgctcgaggatgggcaaaccgccgcgttgatcaccccggacagaatgctc
acgcgccgtgtggccgcaacgctggaccgttgggggatcgagccagatgacagcgccgga
cagcctttgcgccagacggcagtaggccgtcttgtccgacatgttgccgcgctgttcggt
cagaaactcacggcagaggctctgattgtgcttctcaagcatcctatggtgcacgccggt
acagggcgaaaccagcacctgaaatgggtccgggaactggaacgccgcctgcgccgctat
ggaccgcccttccccgatgccgcagcacttgcaacttgggccgaagggaaccgccgcaaa
ggcgacgccggaccggacccgcgcccttgggcagaatgggtcgcagaaacttgtctcggc
cacgaaaatcccgccgatggcggacaaacccgtgtgccccttctcgatatgaccaaccgg
cttcttgcaacggtcgaggcgctggcgattggagccgatggtgatcacacggcactgaaa
gtctgggacgaccccgatggaaaggcagcgcacaaggcgcttggcgaattgctgaacgaa
gcaccttgcgcagcgccggtgacatcctccgcatttcgggcgctgctggacagcatcatg
ggcggcgaagttcgcgagccgatcacaccggacccacgggttatgatctggggcacgctt
gaagcgcgcgtgcagggggcggatcttgtgatccttggcagcctgaatgatggaagctgg
cccgagatgcccgcacccgacccgtggctgaaccgccggatgcgcaaagaggcggacttg
ttgcttccagaacgccggatcggactttcagcgcatgactttcaacaggccatcgccgcg
cccgacgttgttctgtcacgcgcccggcgagacggcgaagcggaaaccgtgccctcgcgc
tggctcaaccgcattgtgaaccttctgggggggctgacggcgcaacgcgggccagaggcc
ttggccgagatgcgagagcgcggcgcacactggacacggctggcgcacgcgatggacaga
cccgcgaccgcggcgcagcccgcgtcgcgaccgtcgccgcaaccgcccgttgcgcaccgg
ccgcgcagtctgccggtgacagatgtcgaaacgctcgtgcgggacccctatgcgatatat
gcaaagagaatcctcaaactgcgagggctggacccgcttcaccgtgatccggatgctcgt
gatcggggccgggtgcttcaccttgtgatggaacggtttgtgcccgaattttccagtatc
gcgcccgaagaccgccgggcgcgccttttggcggtcgcgcaggacgttcttgttgaagaa
gtcccatggccgaccgcacgccggctttggatggcccgacttgcaaaagttgctgacatt
tttctggcagacgagctcgcacgtcatgcagtggccctgccactgaagggcgagcaattg
ggcacgctgaagctcaccgcacctgatttcactttgaccgcaaaggcagaccggatcgac
ctcacggacgacggcagatacgtcatctacgactacaagacaggcgcgccgcccaccgag
agcaggcaaaaggtatttgccaaacagcttttgctggaagctgtcattgccgaacaagcc
ggcttcggcacgcagccagccgcccatgttctgcgtgccgagtatatcggtctgggcagc
accccaaagaacgtcgccgcgccgctggacaaaatgcctccagacacaacactggccgaa
ttccggaaactggtcgccgaatatgatgatccagcaaccgggtataccgcccagacagca
ccagagtctgaagcctttgacggcgactacctgttactggcccgcgccggggaatgggat
ctgagcgatagtcctaaacccgaaaaggtgggccaatga
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