Rhodobacteraceae bacterium SC52: G5B39_03815
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Entry
G5B39_03815 CDS
T06457
Symbol
fdhF
Name
(GenBank) formate dehydrogenase subunit alpha
KO
K00123
formate dehydrogenase major subunit [EC:
1.17.1.9
]
Organism
faq
Rhodobacteraceae bacterium SC52
Pathway
faq00630
Glyoxylate and dicarboxylate metabolism
faq00680
Methane metabolism
faq01100
Metabolic pathways
faq01120
Microbial metabolism in diverse environments
faq01200
Carbon metabolism
Brite
KEGG Orthology (KO) [BR:
faq00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
G5B39_03815 (fdhF)
09102 Energy metabolism
00680 Methane metabolism
G5B39_03815 (fdhF)
Enzymes [BR:
faq01000
]
1. Oxidoreductases
1.17 Acting on CH or CH2 groups
1.17.1 With NAD+ or NADP+ as acceptor
1.17.1.9 formate dehydrogenase
G5B39_03815 (fdhF)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Molybdopterin
Molydop_binding
Fer2_4
NADH-G_4Fe-4S_3
Molybdop_Fe4S4
Fer4_7
Fer4
Fer4_10
Fer4_6
Fer4_9
Fer4_21
Fer4_2
Fer4_15
Fer4_Nqo3
Fer4_17
Fer4_4
Fer4_8
Fer4_16
TPP_enzyme_M
Motif
Other DBs
NCBI-ProteinID:
QIE41162
UniProt:
A0A858CJK8
LinkDB
All DBs
Position
773165..776062
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AA seq
965 aa
AA seq
DB search
MKDFILPSDDRDMGTPAQTGAPVTLTIDGFDVTVPEGTSVMRAAAEAGIQVPKLCATDSL
DAFGSCRLCVVEIEGRRGTPASCTTPVAEGMVVRTQSGKVQKIRRGVMELYISDHPLDCL
TCAANGDCELQDMAGAVGLRDVRYTAPEGAGLSNHFEARNTSGEANPNWTAKDESNPYFT
YDPAKCIVCSRCVRACEEVQGTFALTIEGRGFDSRVKAGGPADSFLTSDCVSCGACVAAC
PTATLQENSVIEIGTPERSVITTCAYCGVGCSFKAELNGDQLVRMVPYKNGKANRGHSCV
KGRFAYGYAAHQDRILKPMIREAITDPWQEVSWDEALGFAADRMRALQQKHGRRSIGVIT
SSRCTNEETYLVQKLARGVFMNNNTDTCARVCHSPTGYGLGQTFGTSAGTQNFDSVEQTD
VVIVIGANPTDGHPVFASRLKKRLRQGAKLIVIDPRRIDLVKSAHIEASHHLALRPGTNV
SVVTALAHVIVTEGLMDEAYIRERCDWDAFQDYAEFVRDPRHSPEATEILTGVPAAELRA
AARLFATGGNGAIYYGLGVTEHSQGSTTVIGIANLAMLTGNVGREGVGVNPLRGQNNVQG
SCDMGSFPHELPGYRHVKNADVRGIFEQAWGVQIDPEPGLRIPNMLDAAVEGTFKGLYCQ
GEDILQSDPDTKHVAAGLAAMECVIVHDLFLNETANYAHVFLPGSTFLEKDGTFTNAERR
INRVRKVMAPRNGYADWEVTQLLAQAMGADWAYTHPSQIMDEIAATTPSFAGVTYDLLEE
KGSVQWPCNEDHPDGTPLMHVDGFVRGKGRFIRTEYVATEEKTGPRFPLLLTTGRILSQY
NVGAQTRRTENVVWHEADVLEIHPHDAEVRGIIEGSWVKLASRSGETALRVELTDRVSPG
VVYTTFHHPDTQANVITTDYSDWATNCPEYKVTAVQVSLSNGPTDWQEDYAAQAAQARRI
LPAAE
NT seq
2898 nt
NT seq
+upstream
nt +downstream
nt
atgaaagactttattctcccaagcgacgatcgtgatatgggcacgcctgcacagaccggc
gctccggttacgctgaccatcgacggcttcgatgtgacggttccagaagggacgtccgtc
atgcgggctgcggccgaagcgggcattcaggtgcccaagctgtgcgccaccgacagcctt
gacgcgttcgggtcctgccgtttgtgtgttgtcgagatcgaaggtcggcggggcacgcct
gcgtcctgcacgacgccggtggccgagggcatggtagtgcgcacccaaagcggcaaggtg
caaaaaatccggcgcggggtgatggagctgtatatctctgatcatccgttggattgcctg
acctgtgcggccaatggcgattgcgaattgcaggatatggccggtgccgtgggtctgcgt
gatgtgcgctacaccgcgccagagggcgccgggctgtcgaaccattttgaggcacgcaac
accagcggtgaggccaaccccaactggacggccaaggatgagagcaacccgtattttacc
tatgatccggccaagtgcatcgtttgctcgcgctgtgtgcgggcctgtgaagaggtgcag
ggcacctttgcgctgaccattgaggggcgcgggtttgacagccgggtcaaagcgggcgga
ccggcggacagtttcctgacctcggattgcgtaagctgcggggcgtgcgtggcggcctgc
ccgacagcgacgcttcaagagaactctgtgatcgaaatcggcactccagagcggtctgtg
atcaccacttgcgcctattgcggtgtgggatgttcgttcaaggccgaactgaacggcgat
cagctggtgcgcatggttccctataagaacggcaaggcgaaccgggggcatagctgtgta
aaggggcgtttcgcttatggctatgctgcgcatcaggaccgtattctgaaacccatgatc
cgcgaggcgatcaccgatccctggcaagaggtcagttgggatgaggcgctgggctttgcc
gctgatcgtatgcgcgcccttcagcaaaagcacgggcggcggtcgattggggtgatcact
tcaagccgctgcacgaacgaggaaacataccttgttcagaagctggcgcgcggcgtgttc
atgaacaacaacactgatacctgtgcgcgggtgtgtcattcgcccaccgggtacgggctt
ggtcagacatttggcacgtcggcgggcacgcagaattttgacagcgttgagcagaccgat
gtcgtgattgtcatcggcgccaatccgacggatgggcacccggtttttgcttcgcgtttg
aaaaaacggttgcggcagggggcgaagctgatcgtgattgatccgcgccggatcgatctg
gtgaaatccgcgcatatcgaggcgtcccatcaccttgcgctgcggcctggcaccaacgtg
tcggtcgtgacggcgctggcccatgtgatcgtcaccgaagggttgatggacgaagcctat
atccgtgagcggtgcgattgggacgcgtttcaggattatgccgagttcgtgcgcgacccg
cgccacagccctgaagcgaccgagattctgacaggcgttccggcagcggagttgcgcgcg
gcggcccggttgtttgccacgggcggcaatggcgcgatttattacgggctgggcgtgacc
gagcacagccaagggtcgaccaccgtcatcggtattgcgaaccttgccatgctcacgggt
aatgtgggccgtgagggcgtcggcgtgaacccgttgcgcgggcagaacaacgtgcaggga
tcgtgtgacatgggcagtttcccgcatgaattgccggggtatcgccatgtgaagaacgcg
gatgtgcgcggcatctttgaacaggcttggggcgtccagatcgacccagagccagggttg
cgcatacccaatatgttggatgccgccgtggagggcactttcaaggggctgtattgtcag
ggtgaagacattttgcagtctgatccggataccaagcacgtagcggcgggtctcgccgcg
atggaatgcgttatcgtccacgatcttttcctgaacgagacggcgaactacgctcatgtg
ttcctgcccggttcgacctttcttgaaaaagacggcacgttcaccaatgccgagcggcgt
atcaatcgcgtgcgcaaggtcatggccccccgtaatgggtatgccgattgggaagtgacc
cagcttttggcgcaggcgatgggggctgactgggcctatacccacccgtcccagatcatg
gacgaaatcgcggcgaccacgcccagcttcgcgggagtcacctatgacctgcttgaggaa
aaagggtctgttcagtggccgtgcaatgaagatcacccagacggcacgccattgatgcat
gttgatgggtttgtgcgcggcaaggggcggttcatccgtaccgagtatgttgcgaccgag
gaaaagaccggtccgcgtttcccgctactgctgaccactggccggattctgtcgcagtat
aatgttggcgcgcagacgcgccggaccgagaatgtcgtctggcacgaggccgatgtgctg
gaaattcaccctcacgatgcggaagtgcgcggaatcatcgaagggtcttgggtcaagctg
gccagccggtccggggaaaccgcgctgcgggttgaactgacggaccgggtcagtcccggt
gtggtctacacgacgtttcaccatcccgatacgcaggccaatgtgatcaccaccgattac
tctgactgggccacgaattgcccggaatacaaggtgacggccgtgcaggtgagcctgtcg
aatggtccaacggactggcaagaggattacgcggcgcaagcggcgcaagcgcggcgtatt
ctgccggcggcagagtga
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