Rhodobacteraceae bacterium SC52: G5B39_04480
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Entry
G5B39_04480 CDS
T06457
Name
(GenBank) ATP-dependent helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
faq
Rhodobacteraceae bacterium SC52
Pathway
faq03420
Nucleotide excision repair
faq03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
faq00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
G5B39_04480
03430 Mismatch repair
G5B39_04480
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
faq03400
]
G5B39_04480
Enzymes [BR:
faq01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
G5B39_04480
DNA repair and recombination proteins [BR:
faq03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
G5B39_04480
MMR (mismatch excision repair)
Other MMR factors
G5B39_04480
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
Viral_helicase1
AAA_30
AAA_11
HHH
Motif
Other DBs
NCBI-ProteinID:
QIE41274
UniProt:
A0A858CJU8
LinkDB
All DBs
Position
909434..911476
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AA seq
680 aa
AA seq
DB search
MAGAGYLDKLNDKQRAAAVFGVGADALPPPLLVIAGAGSGKTSTLAHRVAHLLVNGADPR
RILLMTFSRRAATELTRRVERITAQALGTGTAAEALTWAGTFHGIGARILRENATSIGLH
PEFSIHDREDSADLMNLNRHALGFSKAESRFPAKGTCLAIYSRTVNSEAPLADVLRDHFP
WCASWAEELKCLFATYVAAKQAQNVLDYDDLLLAWAQVMANDAFAAHIGDAWDHVLIDEY
QDTNRLQARILMALKPDGRGLTVVGDDAQSIYAFRAATVRNILDFPNGFTPPADIITLDR
NYRSTQPILAAANAVIGQARERFAKDLWTDRKSADKPRLVTVGTEAEQARFVVDCVLEDR
ETGTRLKDQAVLFRTSSHAVQLEAELTRRNVPYVKFGGLKFLDSAHVKDLLSFLRLARNP
RDRVAGFRVLQLIPGIGPKAAADVLDALDLSADPRAALHDVAPPRRAGADWPEFVQAMTT
DAPWPAALGQARAWYDPHLDRVHEDADARRADLLQLEQIAAGYASAEAFLTDLTLDPPDA
TSDTSGVPLKDEDYLILSTIHSAKGQEWKSVHLLNAVDGCIPSDLGTGSTHELEEERRLL
YVAMTRAKDRLTLGLPLRFYVTQQTRNGDRHVFAMRTRFIPTEILGQFDAFHWSPQHHGG
QARPAPPPIDVAQTMRQMWT
NT seq
2043 nt
NT seq
+upstream
nt +downstream
nt
gtggcgggcgcagggtatctcgacaagctgaatgacaaacaacgcgcggcggcggtgttt
ggtgtgggcgcggacgcgctgccgccgcccttgttggtgattgcgggtgcagggtctgga
aagaccagcacgttggcgcaccgcgtggcgcatctgttggtcaatggcgccgatccgcgc
cgaatcctgctgatgacgttttcacgccgcgccgcgaccgagctgacccgccgcgtcgaa
aggatcaccgcgcaagccttgggcacgggcactgccgccgaggcgctgacttgggcgggc
accttccacggcatcggtgcgcggattttgcgggaaaacgccacttcaatcgggctgcac
ccggaattctcgatccatgaccgcgaagacagcgcggacttgatgaacctcaaccgccat
gcgttggggttttccaaggccgaaagcaggtttccggccaagggaacctgtcttgcgatc
tattcccgtacggtgaattctgaagcccccttggcagatgtgctgcgcgatcattttccg
tggtgcgcctcttgggcagaagaactgaagtgccttttcgcgacgtatgtcgcggccaag
caggcgcagaacgtgctggattatgacgatctgttgctggcatgggcgcaggtcatggca
aacgacgcgttcgcggcccatatcggcgacgcgtgggatcacgtgctgattgacgaatat
caggataccaaccgcctgcaagcgcgcatcttgatggcgctgaagccggacgggcgggga
ttgactgttgtgggggatgatgcccagtcgatctatgcgtttcgggccgccacagtgcgc
aacattctggattttccgaacggcttcacgcccccggcagacattatcacgctagaccgg
aattaccgatcgacgcagccgattttggcggcggccaatgccgttatcggacaggcgcgg
gaacggtttgccaaggatctgtggacagatagaaaatcggcggacaagccccgcttggta
accgtcggcacagaagccgaacaggcgcgatttgtcgtggattgtgtgctggaggaccgc
gagacgggcacacggctcaaggatcaggcggtgctgtttcgcacctccagccacgcagtt
cagctagaggcagagctgacgcgccgcaacgtgccatacgtcaagtttggcgggctgaag
tttctcgacagtgcccatgtgaaggatttgctgtccttcttgcggttggcgcgcaatcca
cgcgaccgtgtggccggatttcgcgtgctgcaacttatccccggcattggtcccaaagca
gcggccgatgtgctggacgcgctggatttgtccgccgacccgcgcgcggctttgcatgac
gttgcgccgccccgccgcgccggggctgattggccggaattcgtgcaggccatgaccacc
gatgcgccgtggcctgccgcattaggtcaggcgcgcgcatggtatgacccgcatctggat
cgggtccacgaagatgccgacgcgcggcgggccgatcttttgcaactcgaacagatcgct
gccgggtatgcgtctgccgaagcgttcctgaccgatttgacgcttgatccgcccgatgcc
accagcgacacgtcgggggtcccgctgaaagacgaagattacctgatcttgtcgacgatc
cattccgccaaggggcaagaatggaaatcggtgcatttgctcaacgctgtggacgggtgc
attccatccgatcttggcaccgggtccacccatgagttggaagaagagagacggctttta
tacgttgccatgacgcgggcgaaggatcgtctgacgcttgggttgcctttgcggttctat
gttacccagcagacgcggaatggtgaccggcacgtctttgcaatgcggacgcggttcatc
ccgaccgagattcttggacagttcgatgcttttcactggtctccgcagcatcacggtggc
caagcgcggcccgcgccgccgccgatagatgtggcgcaaacgatgcgtcagatgtggaca
tga
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