Rhodobacteraceae bacterium SC52: G5B39_06725
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Entry
G5B39_06725 CDS
T06457
Name
(GenBank) UvrD-helicase domain-containing protein
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
faq
Rhodobacteraceae bacterium SC52
Pathway
faq03420
Nucleotide excision repair
faq03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
faq00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
G5B39_06725
03430 Mismatch repair
G5B39_06725
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
faq03400
]
G5B39_06725
Enzymes [BR:
faq01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
G5B39_06725
DNA repair and recombination proteins [BR:
faq03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
G5B39_06725
MMR (mismatch excision repair)
Other MMR factors
G5B39_06725
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_30
PcrA_UvrD_tudor
AAA_11
TMP_3
Motif
Other DBs
NCBI-ProteinID:
QIE41675
UniProt:
A0A858CKZ8
LinkDB
All DBs
Position
1371104..1373458
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AA seq
784 aa
AA seq
DB search
MNTDDDENAFMDGYVPLSRRAMGARPTPYLEGLNPEQRRAVETLDGPVLMLAGAGTGKTR
ALTARIAHLLNSGHARPNEVLAVTFTNKAAREMKERVAHLMGTGADGMPWLGTFHAINVK
LLRRHAELAWLKSNFTILDTDDQVRLLKQVIAARGIDEKRWPARQLASLIDGWKNRALTP
AQVPVADASAFNNKGIELYADYQSRLRDLNAADFGDLLLHMVTVFQAHPDLLEQYQRWFR
YILVDEYQDTNVAQYLWLRLLAGGHRNICCVGDDDQSIYGWRGAEVGNILRFEKDFPGAA
VIRLEQNYRSTGHILGAASGVIKGNRDRLGKTLWTDRDGGDKVRLIGHWDGEEEARWVGE
ELEALQGGTRGGRPYSLDDCAILVRASHQMRAFEDRFLTIGLPYRVIGGPRFYERLEIRD
AMAYFRLVISPADDLAFERIVNTPKRGLGDKAVQKIQRAARANGVSLVQAAQIVLAAGEM
SGKGKTELTRFLSLLGQWHAEVLEETHNHIELAEKILDESGYTEMWQNNKTPEAPGRLEN
LKELVKALEQFENLQGFLEHVALIMDNETEEGGAKVSIMTLHAAKGLEFPAVFLPGWEDG
LFPSQRSMDESGQSGLEEERRLAYVGITRAEELCTISFAANRRVYGQWQSAMPSRFIDEM
PEAHVDVLTPPGLYGGGYGAAAGSKIESAAMSANVYNSPGWRRLQNRSGARGTSQPQESR
APVIDMQAVSAFAEGDRVFHQKFGYGAVLGTEGDKLRIAFDKAGEKHVVSRFITSADMAD
NTPF
NT seq
2355 nt
NT seq
+upstream
nt +downstream
nt
atgaacaccgatgatgatgaaaatgctttcatggacggctatgtccccctgtcacgtcgc
gccatgggcgcgcgcccgacgccctatcttgaggggctgaatcctgagcagcgccgcgcg
gtagaaacgctggatgggccagttttgatgcttgcgggggcggggaccggaaaaacacgg
gcgctgacggcgcggatcgcacatttgctgaacagcggccatgcgcggccgaacgaagtg
ctggctgtgacctttaccaacaaggccgcgcgcgagatgaaggagcgtgtcgcgcatctg
atggggaccggcgcggacggcatgccgtggcttggcacattccacgcgatcaatgtcaaa
ctgcttcgccgccatgctgagttggcctggctgaagtcgaatttcaccatccttgatacc
gatgatcaggtgcgccttctcaagcaggttatcgcggcacgcggcattgatgaaaagcgg
tggcccgcgcgtcaactggcgtcgttgatagatggctggaagaaccgtgcgctgacgcct
gcgcaggtgcccgtggcggacgccagcgcgttcaataacaaggggattgagctgtatgcc
gactatcagtcccggttgcgggatttgaatgcggcggatttcggtgacctgttgctgcac
atggtgacggtctttcaggcacatccagacctgcttgagcaataccagcgctggttccgg
tacatccttgtggacgaatatcaggatacaaacgtcgcccaatacctgtggctgcggctg
ctggcgggcgggcaccgcaacatctgctgcgtgggggatgacgatcagtcgatctatggc
tggcgcggggccgaggttggcaacatcctgcggtttgaaaaggatttcccgggcgccgct
gtaatccggctggaacagaactacaggtccaccggtcacattcttggcgcggcgtcgggg
gtcatcaagggcaatcgcgaccggctgggcaaaacgctttggactgaccgcgatggcggc
gacaaggtccgcctgatcggccattgggacggcgaagaagaggcgcgctgggtcggtgaa
gagcttgaggcgctacaaggcggcacccgcggtgggcggccttacagccttgatgattgc
gcgatccttgtgcgggcctctcaccaaatgcgcgcctttgaggatcggttcctgactatc
gggcttccgtaccgcgttatcggcgggccgcgcttttatgaacgtttggaaattcgcgac
gcgatggcctatttccggcttgtgatcagcccggccgatgatcttgcattcgagcggatc
gtgaacacgcccaagcggggcctcggcgacaaagccgtgcaaaagatccagcgtgcggcg
cgggcgaatggggtgtctctggtgcaagccgcgcagatcgtgctggcggcaggcgagatg
tcgggcaaaggcaaaacagaactgacccggttcctgtcccttttgggacagtggcacgct
gaggtgcttgaagagacccacaaccacatcgagttggcagaaaagattctggatgagtct
ggctatacggaaatgtggcagaacaacaaaacgccagaggcacctggtcgtcttgagaac
ctcaaggaacttgttaaggcgcttgaacaattcgagaatcttcaagggttcctagagcat
gtcgcgctgatcatggacaacgaaaccgaagagggcggcgcaaaggtcagcatcatgacg
ctgcatgccgccaagggtctggaatttcccgccgtgtttcttcccgggtgggaagacggg
ctgttcccctcgcagcggtccatggatgaaagcggccaaagcgggctggaggaagaacgt
cgccttgcctatgtcgggatcactcgggcggaagagttgtgcacgatatcttttgccgcg
aaccgcagggtctacggccagtggcaatcggccatgccgtcgcgcttcattgatgaaatg
cccgaggcccatgtggatgtgctgacaccgccagggctttatggcgggggatacggcgct
gctgccgggtcaaagatcgaatcggcggccatgtcggccaatgtttacaactcgccggga
tggcgccgtctgcaaaaccgcagcggtgcgcgcggaacaagccagccacaggaaagccgc
gcgccagttattgatatgcaagccgtgtccgcctttgctgaaggggaccgggtttttcat
cagaagttcgggtatggggccgttttgggcaccgaaggcgacaaattgcggattgccttt
gacaaagctggcgagaagcacgtggtgtcacgatttattaccagcgcagacatggctgat
aacacacctttttaa
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integrated database retrieval system
