KEGG   Rhodobacteraceae bacterium SC52: G5B39_07355
Entry
G5B39_07355       CDS       T06457                                 
Symbol
ihfA
Name
(GenBank) integration host factor subunit alpha
  KO
K04764  integration host factor subunit alpha
Organism
faq  Rhodobacteraceae bacterium SC52
Brite
KEGG Orthology (KO) [BR:faq00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:faq03032]
    G5B39_07355 (ihfA)
   03036 Chromosome and associated proteins [BR:faq03036]
    G5B39_07355 (ihfA)
   03400 DNA repair and recombination proteins [BR:faq03400]
    G5B39_07355 (ihfA)
DNA replication proteins [BR:faq03032]
 Prokaryotic type
  DNA Replication Initiation Factors
   Initiation factors (bacterial)
    G5B39_07355 (ihfA)
Chromosome and associated proteins [BR:faq03036]
 Prokaryotic type
  Nucleoid associated proteins
   IHF (integration host factor)
    G5B39_07355 (ihfA)
DNA repair and recombination proteins [BR:faq03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     Facilitator
      G5B39_07355 (ihfA)
SSDB
Motif
Pfam: Bac_DNA_binding HU-HIG HU-CCDC81_euk_1 HU-CCDC81_bac_2 HU-CCDC81_euk_2 HU-CCDC81_bac_1
Other DBs
NCBI-ProteinID: QIE41788
UniProt: A0A6G6F6B9
LinkDB
Position
complement(1504126..1504428)
AA seq 100 aa
MSGKTLTRMDLSEAVFREVGLSRNESAQLVESVLAHLSDALASGESVKISSFGTFNVRDK
AARVGRNPKTGEEVPIHPRRVLTFRPSHLMKERVAQGNKS
NT seq 303 nt   +upstreamnt  +downstreamnt
atgagtggcaagaccctcacccgcatggacctaagcgaggccgtgttcagagaagtcgga
ttgtcgcgaaatgaatccgcccagcttgttgaaagcgttctggcacatttgagcgacgca
ttggcatctggggaatcggttaaaatttcgtccttcggcaccttcaacgtccgtgacaag
gccgcccgtgtcggtcgcaaccccaagaccggcgaagaagttccgatccatccccgccgc
gttctgaccttcaggccatcgcacctgatgaaagagcgcgtcgcacaaggcaacaagagc
tag

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