Rhodobacteraceae bacterium SC52: G5B39_08365
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Entry
G5B39_08365 CDS
T06457
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
faq
Rhodobacteraceae bacterium SC52
Pathway
faq00260
Glycine, serine and threonine metabolism
faq00460
Cyanoamino acid metabolism
faq00630
Glyoxylate and dicarboxylate metabolism
faq00670
One carbon pool by folate
faq00680
Methane metabolism
faq01100
Metabolic pathways
faq01110
Biosynthesis of secondary metabolites
faq01120
Microbial metabolism in diverse environments
faq01200
Carbon metabolism
faq01230
Biosynthesis of amino acids
faq01240
Biosynthesis of cofactors
faq04981
Folate transport and metabolism
Module
faq_M00140
C1-unit interconversion, prokaryotes
Brite
KEGG Orthology (KO) [BR:
faq00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
G5B39_08365
09102 Energy metabolism
00680 Methane metabolism
G5B39_08365
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
G5B39_08365
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
G5B39_08365
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
G5B39_08365
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
G5B39_08365
Enzymes [BR:
faq01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
G5B39_08365
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GFIT
Motif
Pfam:
SHMT
Aminotran_1_2
DegT_DnrJ_EryC1
Motif
Other DBs
NCBI-ProteinID:
QIE41967
LinkDB
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Position
complement(1694823..1696118)
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AA seq
431 aa
AA seq
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MNAPHRDTGFFTESLTSRDPELFGAITSELGRQRDEIELIASENIVSRAVMEAQGSVMTN
KYAEGYPGRRYYGGCQYVDIAENLAIERACKLFNCGFANVQPNSGSQANQGVFTALLQPG
DTILGMSLDAGGHLTHGARPNQSGKWFNAVQYGVREDDLLPDYDQIERLAKEHQPQMIIA
GGSAIPRVLDLKRFREIADMVGAYLLVDMAHFAGLVATGAYPSPFPHAHVATTTTHKTLR
GPRGGMILTNDEALAKKFNSAIFPGIQGGPLMHVIAAKAVAFGEALRPEFTTYMEQVVKN
AQAMSDQLIKGGLGTVTGGTDTHLLLVDLRPKGVKGNATETALGRAHITCNKNGIPFDTE
KPMITSGIRLGSPAGTTRGFAEDEFRQIADWIVQVVDGLAASNGEGNPDVEAKVKSEVLE
LCGRFPIYPTL
NT seq
1296 nt
NT seq
+upstream
nt +downstream
nt
atgaacgcaccccatcgtgataccggctttttcaccgaaagcctgaccagccgcgaccca
gaactcttcggcgcgatcaccagcgaacttggtcgccagcgcgacgagattgaactgatc
gcatccgaaaacatcgtcagccgcgcggtcatggaagcgcagggttcggtgatgaccaac
aaatacgccgaaggctaccccggtcggcggtactatggtggatgccaatacgtggacatc
gccgaaaatctcgctatcgagcgcgcctgcaagctcttcaactgcggcttcgcaaacgtg
cagccaaactcgggcagccaagcgaaccaaggtgtgttcaccgcgctgctgcaacccggc
gacaccattctgggcatgagccttgatgccggcggccacctgacccacggtgcgcgcccc
aaccagtcaggcaaatggttcaacgccgtgcaatacggcgtacgcgaagacgatcttctg
ccagattacgatcagatcgaacgactggcgaaagagcatcagccacagatgatcatcgca
ggcgggtcggcgatccctcgcgttcttgacctcaagcgcttccgcgaaatcgcggacatg
gtgggtgcctacctcttggtggacatggcgcatttcgcaggtctcgtggccacgggggcc
tacccgtcgcccttcccacacgcccatgtggcgaccacaaccacacacaagaccctgcgc
ggcccgcgtggcggcatgatcctcaccaatgacgaggcgcttgcgaagaaattcaactcc
gccatcttccccggcattcagggcggaccgctgatgcacgtgatcgccgccaaggctgtg
gcattcggcgaagcgctgcgtcccgaattcacgacttacatggaacaggtcgtgaagaac
gcccaggccatgtcggatcagttgatcaaaggtgggcttggcaccgttacaggcggcaca
gacacccacctgctgttggtggacctgcggcccaagggcgtgaaaggcaacgcgactgaa
accgcactcggccgcgcacatatcacctgcaacaagaacggcatccccttcgataccgaa
aagccgatgatcacctcgggcatccggcttggcagcccggcgggcaccacacgcggcttt
gccgaagatgaattccgccagatcgcggattggatcgttcaggttgttgacgggttggcc
gcctcaaacggcgaaggcaacccagacgtggaagccaaggtaaagtccgaagtgctggaa
ctgtgcgggcgcttcccgatctacccgacgctctga
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