Rhodobacteraceae bacterium SC52: G5B39_10125
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Entry
G5B39_10125 CDS
T06457
Symbol
rimK
Name
(GenBank) 30S ribosomal protein S6--L-glutamate ligase
KO
K05844
ribosomal protein S6--L-glutamate ligase [EC:6.3.2.-]
Organism
faq
Rhodobacteraceae bacterium SC52
Brite
KEGG Orthology (KO) [BR:
faq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
faq03009
]
G5B39_10125 (rimK)
Ribosome biogenesis [BR:
faq03009
]
Prokaryotic type
ribosomal protein modification factors
G5B39_10125 (rimK)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RimK
Rimk_N
Zn_protease
GSH-S_ATP
ATP-grasp_3
ATPgrasp_ST
LysX_preATP_grasp
TTL
Motif
Other DBs
NCBI-ProteinID:
QIE42260
UniProt:
A0A858CM62
LinkDB
All DBs
Position
2071891..2073330
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AA seq
479 aa
AA seq
DB search
MSETDNDAGDFRIGWEEWVSLPSLGLPALRAKIDTGARTSALHAFDIEAFGPPSAPKVRF
AIHPIPGRDDVTIPCSANVIDRREVTSSNGESEWRYVIQTELSLGDHHWPIEITLTNRTQ
MSYRMLLGRQALRDDMIITPSHRFCQPQKTYDVYHSAAVKAAAPTRALRIAVLSREETNY
STRRLVEEGEKRGHVVEVIDTTRCYMAINKLSPEVHYDGKRLARYDAIIPRIGASITPYG
TAVVRQFETIGTYCVNPSDGITASRDKLHAHQILAGQRIGMPATAFAASPKDTANLIGLV
GSAPLIVKLLESTQGKGVVLAETRKAAESVIDAFRGLKANFLVQQFVKEANGEDIRCLVI
GGRVVASMKRSAAEGEFRSNLHRGGQAASVRITKVERDTAVRAARAFRLNMAGVDLLRSD
DGPKVLEVNSSPGFEGIEKASRKNIAALLYDDIEKRVRPTPARRRAGTATVPDASNEVG
NT seq
1440 nt
NT seq
+upstream
nt +downstream
nt
atgagcgaaaccgacaacgacgccggtgactttcgtatcggttgggaagaatgggtaagc
ttgccctccctcggccttccagctttgcgggccaagatcgacaccggcgcgcgcacatct
gcattgcatgcctttgatattgaagcattcggcccgccgagtgctcccaaggtgcgattt
gccattcacccaattccaggccgcgacgatgtcacgatcccctgctcggcaaatgtcatc
gaccggcgcgaggtcacgtcgtcgaatggcgaatccgaatggcgctatgtcattcagaca
gaactcagtctgggcgatcaccactggccgatcgagatcacgctcaccaatcggacccag
atgtcttaccggatgttgctgggtcgtcaggcgctgcgcgatgatatgatcatcacccca
tcacaccggttttgccagccgcagaaaacctatgacgtgtaccattccgccgctgttaaa
gccgccgcgcccacacgcgccctgcggattgccgttctgagccgtgaagagacaaattat
tccacccggcgacttgtggaagaaggcgaaaagcgcggacatgtggttgaagttatcgac
acaacacgttgttatatggctataaacaagctgtcaccggaagttcactatgacggcaaa
cggctggcacggtacgacgcgatcattccccgcatcggcgcatcgataaccccttatggc
accgctgttgtcaggcagttcgaaaccatcggcacctattgtgtgaacccgtctgacggc
atcaccgcgagccgggacaaactgcatgcccaccaaattcttgccggtcagcggattggc
atgcctgccacggcgtttgctgcctcgccaaaggatacagcaaacctgatcgggcttgtc
ggaagcgcccccctaattgtgaagttgctggaaagcacccaaggcaagggcgttgtgctg
gcagaaacgcgcaaggccgctgaatctgtgatcgacgcgttccgggggctcaaggcaaat
tttctggtccagcaattcgtcaaagaagccaatggagaggacattcgctgtctagtgatc
ggcggcagagtggttgcttccatgaagaggtccgccgccgaaggtgagtttcgatccaat
ttgcatcgcggcggtcaggcggcatctgtccggattaccaaggtggaacgcgataccgcc
gttcgggcggcgcgggcgttccggctgaatatggctggggttgatctgctaagatctgat
gatggaccaaaggttctggaggtgaattcatcgccgggatttgaggggatcgaaaaggcc
agccgcaagaatatcgcagctttgctttatgatgacattgaaaaacgggtgcgccctact
ccggcccgtaggcgcgccggaacggcgacggttcccgacgcgagcaacgaagtcggctaa
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