Rhodobacteraceae bacterium SC52: G5B39_10430
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Entry
G5B39_10430 CDS
T06457
Name
(GenBank) L,D-transpeptidase family protein
KO
K21470
L,D-transpeptidase YcbB
Organism
faq
Rhodobacteraceae bacterium SC52
Brite
KEGG Orthology (KO) [BR:
faq00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
faq01002
]
G5B39_10430
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
faq01011
]
G5B39_10430
Peptidases and inhibitors [BR:
faq01002
]
Cysteine peptidases
Family C82
G5B39_10430
Peptidoglycan biosynthesis and degradation proteins [BR:
faq01011
]
Peptidoglycan biosynthesis and degradation
Transpeptidase
G5B39_10430
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Scaffold
YkuD
PG_binding_1
Motif
Other DBs
NCBI-ProteinID:
QIE42317
UniProt:
A0A858CN18
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All DBs
Position
complement(2131876..2133477)
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AA seq
533 aa
AA seq
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MIQALARRLSVVALASFVFSATPLVAQSGGGALQQAIAGEVARDAALREFYASRNYAPIW
VSGSGADKRRTKALFDALGKAGDHALPAASYRVDDLTRAVRAASGVSERAKVEVALSRAF
SDYAQDVQSGVLIPSRVTSEIDRAAPRRGQAATLAAFVKSSPSGFLRALPPQTDQYEHLI
KEKERLEKVIGAGGWGAKVSGGTLKPGMSSAQIPVLRVRLARLGYGRASNSAAYDADLQQ
EVAKFQRDHGLSPDAVVGPGTMSELNKTAAERLSQVVVAMERERWMNFPLGRRHVWVNIP
DFHVKLIENGRVTFETRSVVGQNRRTHRTPEFSDVMEFMVINPTWNVPYSIATKEYLPML
KKDPNAVSHLQLLDKNGNRVSRASVDFASYSSSNFPYRLKEPPNDGNALGLVKFMFPNTH
NIYLHDTPSKSLFARGQRTFSHGCVRLADPFDFAYALLKGQSSNPKATFQKRLSTGRESV
VMLEDPPRVHLVYRTAIGQPRGAAHYRPDIYGRDAAIFSALTKAGVSLRAVGG
NT seq
1602 nt
NT seq
+upstream
nt +downstream
nt
atgatacaggcacttgcccgacggctctcagtggtggcacttgccagtttcgttttctcc
gcaacaccattggttgcacaatctggtggcggtgcgctgcagcaggccatcgctggtgaa
gtcgcgcgggacgccgcattgcgcgaattttatgcatcccgcaattacgcgccgatctgg
gtcagcggatccggggccgacaaacgcagaacaaaggcgctgtttgatgcgcttggcaaa
gccggtgatcatgcactgcctgcggcgtcgtaccgtgtcgatgatctgacccgggcggtg
cgcgcagcgtccggcgtgagtgaacgcgccaaggttgaagttgcattgtctcgcgccttt
tctgactacgctcaagacgtacaatccggtgttcttataccgtcgcgcgtgacttccgag
attgaccgcgccgcgccgcgccgggggcaggcggcaacattggcagcattcgtcaaatcg
tcgccgtcggggtttctccgcgcgttgccgcctcaaactgaccagtacgagcatttgatt
aaagaaaaagagcggcttgaaaaggtcatcggagccggcggttggggggcgaaagtcagc
gggggcactttgaagccggggatgtcgtcggctcagattcctgtgttgcgcgtgcgtctt
gcgcggctgggttatggtcgggcttcaaactcggccgcgtatgacgccgatttgcagcaa
gaggttgccaagtttcagagggatcacggcctttcgcctgatgctgtggttggccccgga
acaatgagtgagctgaacaagaccgcggcagagcgtctgtctcaggtcgtcgtcgctatg
gaacgtgagcgttggatgaatttcccgcttgggcgacgccatgtctgggtgaatattccc
gattttcacgtgaagctgatcgaaaacggccgcgtcacttttgaaacacggtcagtggtt
ggccagaaccgcagaacgcaccgcacacctgaattctcggatgtgatggaattcatggtg
atcaatccaacgtggaatgtcccgtactcgattgccaccaaagaatacttgccgatgctc
aagaaagacccgaatgcggtgtcccacttgcagttgctggacaagaacgggaaccgggtt
tcccgcgcatcggttgactttgcaagctacagttcatccaactttccctaccggctaaaa
gagcctcccaatgatggaaatgcgcttgggttggtaaagttcatgttccccaatactcac
aacatctatctgcatgacacgccctcaaaatccctttttgcgcgtggtcaacgcactttc
agtcatggatgtgtgcgtttggctgacccgttcgatttcgcctatgcgctgctgaaaggt
caatccagcaacccgaaagctacgtttcaaaagcggctttcgaccgggcgcgaaagcgtt
gtgatgctggaagacccgccccgtgttcacttggtgtatcggacagccatcggacaaccg
cgcggtgcggcacactatcggcccgacatttatggccgggacgccgcgatcttttccgcg
ttgaccaaagccggggtttcgcttcgcgcagtgggcggataa
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