Rhodobacteraceae bacterium SC52: G5B39_12495
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Entry
G5B39_12495 CDS
T06457
Symbol
rimO
Name
(GenBank) 30S ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
faq
Rhodobacteraceae bacterium SC52
Brite
KEGG Orthology (KO) [BR:
faq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
faq03009
]
G5B39_12495 (rimO)
Enzymes [BR:
faq01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
G5B39_12495 (rimO)
Ribosome biogenesis [BR:
faq03009
]
Prokaryotic type
ribosomal protein modification factors
G5B39_12495 (rimO)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
TRAM_2
UPF0004
ACP_syn_III
CLP1_P
Motif
Other DBs
NCBI-ProteinID:
QIE42670
UniProt:
A0A858CNC0
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All DBs
Position
2543112..2544485
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AA seq
457 aa
AA seq
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MDINPPNLRPDLAPKVQLPRDKRPGQPTIGMVSLGCPKALVDSERILTRLRAEGYAISAD
YAGADAVVVNTCGFLDSAKAESLDAIGEALRENGRVIVTGCLGAEPDYITGAHPRVLAVT
GPHQYEQVLDAVHTAVPPRPDPFVDLLPAQAVTLTPRHYSYLKISEGCNHACKFCVIPDM
RGRLNSRPVAAVMREAEKLVQAGVRELLVISQDTSAYGTDWKDRPTRAPITDLARDLGSL
GAWVRLHYVYPYPHVRDMIPLMADPANGVLPYLDIPFQHAHPDVLKRMARPAASARTLDE
IAAWRSVCPDITLRSTFIVGYPGETEAEFQTLLDWLDEAKLDRVGCFQYENVAGARANAL
PNHVPDEIKQDRWNRFMEKSQAISAAKLEAKVGTRMQVLVDLVEDDAATCRTMADAPEID
GNLFIDEGHEGLKPGDLVTVNVDEAGDYDLWGQISGQ
NT seq
1374 nt
NT seq
+upstream
nt +downstream
nt
atggatatcaacccgccgaatcttcgccccgatcttgcgcccaaggtgcagttgccgcgt
gacaaacgccccggtcagccgaccattggcatggtcagccttggctgcccaaaggcactg
gtcgacagcgaacggattttgacccgtctacgcgccgaaggctatgcgatcagtgcggat
tatgcgggcgctgatgctgtggtggtgaacacatgcggcttcctggatagtgccaaggcc
gaaagtctggatgctatcggcgaggccctgcgcgaaaacgggcgcgtcattgtcaccgga
tgtctaggcgcagagcctgattatatcactggcgcacacccgcgggtgctggccgtgaca
ggtccacatcaatacgaacaagttctggatgccgtgcataccgcagtaccgcccaggccc
gatccgtttgtcgatctacttcccgcacaagcagtcaccctgacaccgcgccactacagc
tatctgaagatttcagagggctgcaaccatgcctgcaagttctgtgtgatcccggacatg
cgcggacgcttgaacagccgtcccgttgctgccgtcatgcgcgaagctgaaaaactggtt
caggcaggtgtgcgcgaattgctggtcatcagtcaggatacatctgcttatggcaccgac
tggaaagaccgccccacaagggcgccgataaccgatctggcgcgcgatttgggcagcctc
ggggcatgggtgcgtctgcattatgtttacccctacccccatgtgcgcgacatgatcccg
ctgatggcggatccggccaacggcgttttgccatatttggacattccgtttcagcatgcg
catcccgacgttctcaaacgcatggcacgcccagcggccagcgcgcgcaccttggacgag
atcgcagcgtggcgcagcgtttgccccgacatcacgctgcgatcgactttcatcgttgga
taccccggcgaaaccgaagccgagttccagacgctgctcgactggttggatgaagccaag
ctcgaccgggtcggctgtttccagtatgaaaacgtggcaggtgcgcgagcgaatgccctg
cccaatcatgttcccgacgaaatcaagcaagaccgctggaaccggttcatggaaaagtcg
caggctatttccgccgccaaattggaagcaaaggtcggcacgcggatgcaggtccttgtt
gatctggttgaagacgatgccgccacatgccgcacgatggcagatgcccctgaaatcgat
ggcaacctgttcattgacgaagggcacgaagggctaaaacccggggaccttgtgacggta
aatgtggacgaagccggggattatgacctttggggccaaatatcgggacagtag
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