Rhodobacteraceae bacterium SC52: G5B39_13480
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Entry
G5B39_13480 CDS
T06457
Symbol
lpdA
Name
(GenBank) dihydrolipoyl dehydrogenase
KO
K00382
dihydrolipoyl dehydrogenase [EC:
1.8.1.4
]
Organism
faq
Rhodobacteraceae bacterium SC52
Pathway
faq00010
Glycolysis / Gluconeogenesis
faq00020
Citrate cycle (TCA cycle)
faq00260
Glycine, serine and threonine metabolism
faq00280
Valine, leucine and isoleucine degradation
faq00310
Lysine degradation
faq00380
Tryptophan metabolism
faq00620
Pyruvate metabolism
faq00630
Glyoxylate and dicarboxylate metabolism
faq00640
Propanoate metabolism
faq00670
One carbon pool by folate
faq00785
Lipoic acid metabolism
faq01100
Metabolic pathways
faq01110
Biosynthesis of secondary metabolites
faq01120
Microbial metabolism in diverse environments
faq01200
Carbon metabolism
faq01210
2-Oxocarboxylic acid metabolism
faq01240
Biosynthesis of cofactors
Module
faq_M00009
Citrate cycle (TCA cycle, Krebs cycle)
faq_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
faq_M00307
Pyruvate oxidation, pyruvate => acetyl-CoA
faq_M00621
Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:
faq00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00010 Glycolysis / Gluconeogenesis
G5B39_13480 (lpdA)
00020 Citrate cycle (TCA cycle)
G5B39_13480 (lpdA)
00620 Pyruvate metabolism
G5B39_13480 (lpdA)
00630 Glyoxylate and dicarboxylate metabolism
G5B39_13480 (lpdA)
00640 Propanoate metabolism
G5B39_13480 (lpdA)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
G5B39_13480 (lpdA)
00280 Valine, leucine and isoleucine degradation
G5B39_13480 (lpdA)
00310 Lysine degradation
G5B39_13480 (lpdA)
00380 Tryptophan metabolism
G5B39_13480 (lpdA)
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
G5B39_13480 (lpdA)
00670 One carbon pool by folate
G5B39_13480 (lpdA)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
faq04147
]
G5B39_13480 (lpdA)
Enzymes [BR:
faq01000
]
1. Oxidoreductases
1.8 Acting on a sulfur group of donors
1.8.1 With NAD+ or NADP+ as acceptor
1.8.1.4 dihydrolipoyl dehydrogenase
G5B39_13480 (lpdA)
Exosome [BR:
faq04147
]
Exosomal proteins
Exosomal proteins of breast cancer cells
G5B39_13480 (lpdA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pyr_redox_2
Pyr_redox_dim
Biotin_lipoyl
Pyr_redox
FAD_oxidored
Pyr_redox_3
Biotin_lipoyl_2
GIDA
HI0933_like
FAD_binding_2
NAD_binding_8
AlaDh_PNT_C
GCV_H
DAO
3HCDH_N
FAD_binding_3
NQRA_N
Thi4
Motif
Other DBs
NCBI-ProteinID:
QIE43051
UniProt:
A0A858CQF7
LinkDB
All DBs
Position
pSC52_1:109018..110772
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AA seq
584 aa
AA seq
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MDVKVPDIGDFSDVPVVSVLVSVGDVVAAEDPLIELESDKATMEVPSPAAGKITEIKVAE
GDKVGEGSVIMVMEAEGAADAEAVEAPSSAASAPAAPAAAAPATGTATGPGDKHAEVVVL
GSGPGGYTAAFRAADLGKSVILIERYPSLGGVCLNVGCIPSKALLHVAKVITEAEDMGSH
GVTFAKPKIDLDELRKFKNSVIGQLTGGLGGLAKARKVTTVQGVGTFTGPNMIEVAGADG
TTTTVSFDQCIIAAGSEPVKLPFVPHDDPRVIDSTGALELADIPGKLLVLGGGIIGLEMA
CVYDALGTKVTVVELMDQIIPGADKDIVKPLMTRIKGRYDNILLKTKVTDVKAQKNGLKV
TFEDDKGETSSQIFDKVLVAVGRRPNGGKIEAGAAGVAVDERGFIAVDNQQRTNVPHIFA
IGDLVGQPMLAHKAVHEGKVAAEVCAGHKRAFDARVIPSVAYTDPEVAWAGVTETEAKAK
GIKYEKGVFPWAASGRALSNARSEGLTKLLFDPEDDRVIGCAIVGTNAGDLIAEAALAIE
MGADAVDLGHTIHPHPTLSETVNFAAEMFEGTITDLMPPKKKKH
NT seq
1755 nt
NT seq
+upstream
nt +downstream
nt
atggatgtgaaagtacccgatatcggcgatttctccgatgtgccggtggtctcggttctt
gtatcggtgggcgacgtcgtcgccgccgaggacccgctgatcgaactggaaagcgataaa
gccacgatggaggttcccagccccgccgcaggcaagatcaccgagatcaaggtggccgag
ggcgacaaggtcggtgaaggcagcgtgatcatggttatggaggcggaaggggctgcagat
gccgaggccgtcgaggccccgtcctctgccgcgtccgcgccggcggctcctgccgccgcc
gcacccgcgacgggcacagccactggacccggtgacaagcatgccgaggtggttgttctg
ggctctgggccgggcggctacacggctgcgttccgcgccgcggacctgggcaagtcggtg
atcttgatcgaacgctatccgtctttgggcggcgtgtgtttgaacgtgggctgtatcccg
tcgaaagcgttgttgcacgtggccaaggtgattaccgaagccgaggacatgggcagccac
ggcgtgacctttgccaagccaaagatcgatctggacgagttgcgcaagttcaaaaacagc
gtaatcggtcaattgaccggcggtcttggcggtttggccaaggcacgtaaggtcacgacc
gttcaaggcgttggcaccttcacgggtcccaacatgatcgaagttgcgggtgccgatggc
acgactacgactgttagctttgatcagtgcatcatcgcggccgggtctgagccggtgaag
ctgccattcgtgccccatgacgatccgcgcgtaattgacagcacgggcgcgcttgagctt
gcggatattcccggcaagctgcttgtgttggggggcggcatcattgggctagaaatggcc
tgtgtgtacgatgcgcttggaaccaaggtcactgtggtcgagctgatggatcagatcatt
cccggcgccgacaaggatatcgtcaagccgcttatgacccggatcaaggggcggtacgac
aacatcctgctcaagaccaaagtcacggatgtgaaggcccagaagaacggtctgaaggtg
acatttgaagacgataagggcgaaacgtcgtcgcagatctttgacaaggttctggttgcc
gtcggtcgtcgcccgaatggcggaaagatcgaggcaggtgcagcaggtgtcgccgtcgac
gagcgcggtttcattgccgtggacaaccagcagcgtacaaatgttccgcatatctttgcg
atcggcgatctggttgggcagccgatgttggcacacaaggccgtgcacgagggcaaggtg
gccgcagaggtttgcgcgggtcacaaacgggcgtttgatgcgcgtgtcatcccgtcggtg
gcctataccgatcccgaagtagcttgggccggtgtgaccgaaaccgaggcgaaggccaag
ggcatcaagtatgaaaagggtgtcttcccgtgggcggcatcgggccgcgcgctatccaat
gcgcgcagtgaagggctgacgaagttgctgtttgatccggaagacgaccgtgtcatcggc
tgcgccatcgttgggaccaatgcaggcgatctgattgccgaagctgccttggcgattgag
atgggggcagatgcggttgatcttgggcacactattcacccgcacccaaccctgtcagaa
accgtgaacttcgcggccgaaatgtttgaaggtacgatcacggacctgatgccgccgaag
aaaaagaagcactga
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