KEGG   Rhodobacteraceae bacterium SC52: G5B39_13480
Entry
G5B39_13480       CDS       T06457                                 
Symbol
lpdA
Name
(GenBank) dihydrolipoyl dehydrogenase
  KO
K00382  dihydrolipoyl dehydrogenase [EC:1.8.1.4]
Organism
faq  Rhodobacteraceae bacterium SC52
Pathway
faq00010  Glycolysis / Gluconeogenesis
faq00020  Citrate cycle (TCA cycle)
faq00260  Glycine, serine and threonine metabolism
faq00280  Valine, leucine and isoleucine degradation
faq00310  Lysine degradation
faq00380  Tryptophan metabolism
faq00620  Pyruvate metabolism
faq00630  Glyoxylate and dicarboxylate metabolism
faq00640  Propanoate metabolism
faq00670  One carbon pool by folate
faq00785  Lipoic acid metabolism
faq01100  Metabolic pathways
faq01110  Biosynthesis of secondary metabolites
faq01120  Microbial metabolism in diverse environments
faq01200  Carbon metabolism
faq01210  2-Oxocarboxylic acid metabolism
faq01240  Biosynthesis of cofactors
Module
faq_M00009  Citrate cycle (TCA cycle, Krebs cycle)
faq_M00011  Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
faq_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA
faq_M00621  Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:faq00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00010 Glycolysis / Gluconeogenesis
    G5B39_13480 (lpdA)
   00020 Citrate cycle (TCA cycle)
    G5B39_13480 (lpdA)
   00620 Pyruvate metabolism
    G5B39_13480 (lpdA)
   00630 Glyoxylate and dicarboxylate metabolism
    G5B39_13480 (lpdA)
   00640 Propanoate metabolism
    G5B39_13480 (lpdA)
  09105 Amino acid metabolism
   00260 Glycine, serine and threonine metabolism
    G5B39_13480 (lpdA)
   00280 Valine, leucine and isoleucine degradation
    G5B39_13480 (lpdA)
   00310 Lysine degradation
    G5B39_13480 (lpdA)
   00380 Tryptophan metabolism
    G5B39_13480 (lpdA)
  09108 Metabolism of cofactors and vitamins
   00785 Lipoic acid metabolism
    G5B39_13480 (lpdA)
   00670 One carbon pool by folate
    G5B39_13480 (lpdA)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:faq04147]
    G5B39_13480 (lpdA)
Enzymes [BR:faq01000]
 1. Oxidoreductases
  1.8  Acting on a sulfur group of donors
   1.8.1  With NAD+ or NADP+ as acceptor
    1.8.1.4  dihydrolipoyl dehydrogenase
     G5B39_13480 (lpdA)
Exosome [BR:faq04147]
 Exosomal proteins
  Exosomal proteins of breast cancer cells
   G5B39_13480 (lpdA)
SSDB
Motif
Pfam: Pyr_redox_2 Pyr_redox_dim Biotin_lipoyl Pyr_redox FAD_oxidored Pyr_redox_3 Biotin_lipoyl_2 GIDA HI0933_like FAD_binding_2 NAD_binding_8 AlaDh_PNT_C GCV_H DAO 3HCDH_N FAD_binding_3 NQRA_N Thi4
Other DBs
NCBI-ProteinID: QIE43051
UniProt: A0A858CQF7
LinkDB
Position
pSC52_1:109018..110772
AA seq 584 aa
MDVKVPDIGDFSDVPVVSVLVSVGDVVAAEDPLIELESDKATMEVPSPAAGKITEIKVAE
GDKVGEGSVIMVMEAEGAADAEAVEAPSSAASAPAAPAAAAPATGTATGPGDKHAEVVVL
GSGPGGYTAAFRAADLGKSVILIERYPSLGGVCLNVGCIPSKALLHVAKVITEAEDMGSH
GVTFAKPKIDLDELRKFKNSVIGQLTGGLGGLAKARKVTTVQGVGTFTGPNMIEVAGADG
TTTTVSFDQCIIAAGSEPVKLPFVPHDDPRVIDSTGALELADIPGKLLVLGGGIIGLEMA
CVYDALGTKVTVVELMDQIIPGADKDIVKPLMTRIKGRYDNILLKTKVTDVKAQKNGLKV
TFEDDKGETSSQIFDKVLVAVGRRPNGGKIEAGAAGVAVDERGFIAVDNQQRTNVPHIFA
IGDLVGQPMLAHKAVHEGKVAAEVCAGHKRAFDARVIPSVAYTDPEVAWAGVTETEAKAK
GIKYEKGVFPWAASGRALSNARSEGLTKLLFDPEDDRVIGCAIVGTNAGDLIAEAALAIE
MGADAVDLGHTIHPHPTLSETVNFAAEMFEGTITDLMPPKKKKH
NT seq 1755 nt   +upstreamnt  +downstreamnt
atggatgtgaaagtacccgatatcggcgatttctccgatgtgccggtggtctcggttctt
gtatcggtgggcgacgtcgtcgccgccgaggacccgctgatcgaactggaaagcgataaa
gccacgatggaggttcccagccccgccgcaggcaagatcaccgagatcaaggtggccgag
ggcgacaaggtcggtgaaggcagcgtgatcatggttatggaggcggaaggggctgcagat
gccgaggccgtcgaggccccgtcctctgccgcgtccgcgccggcggctcctgccgccgcc
gcacccgcgacgggcacagccactggacccggtgacaagcatgccgaggtggttgttctg
ggctctgggccgggcggctacacggctgcgttccgcgccgcggacctgggcaagtcggtg
atcttgatcgaacgctatccgtctttgggcggcgtgtgtttgaacgtgggctgtatcccg
tcgaaagcgttgttgcacgtggccaaggtgattaccgaagccgaggacatgggcagccac
ggcgtgacctttgccaagccaaagatcgatctggacgagttgcgcaagttcaaaaacagc
gtaatcggtcaattgaccggcggtcttggcggtttggccaaggcacgtaaggtcacgacc
gttcaaggcgttggcaccttcacgggtcccaacatgatcgaagttgcgggtgccgatggc
acgactacgactgttagctttgatcagtgcatcatcgcggccgggtctgagccggtgaag
ctgccattcgtgccccatgacgatccgcgcgtaattgacagcacgggcgcgcttgagctt
gcggatattcccggcaagctgcttgtgttggggggcggcatcattgggctagaaatggcc
tgtgtgtacgatgcgcttggaaccaaggtcactgtggtcgagctgatggatcagatcatt
cccggcgccgacaaggatatcgtcaagccgcttatgacccggatcaaggggcggtacgac
aacatcctgctcaagaccaaagtcacggatgtgaaggcccagaagaacggtctgaaggtg
acatttgaagacgataagggcgaaacgtcgtcgcagatctttgacaaggttctggttgcc
gtcggtcgtcgcccgaatggcggaaagatcgaggcaggtgcagcaggtgtcgccgtcgac
gagcgcggtttcattgccgtggacaaccagcagcgtacaaatgttccgcatatctttgcg
atcggcgatctggttgggcagccgatgttggcacacaaggccgtgcacgagggcaaggtg
gccgcagaggtttgcgcgggtcacaaacgggcgtttgatgcgcgtgtcatcccgtcggtg
gcctataccgatcccgaagtagcttgggccggtgtgaccgaaaccgaggcgaaggccaag
ggcatcaagtatgaaaagggtgtcttcccgtgggcggcatcgggccgcgcgctatccaat
gcgcgcagtgaagggctgacgaagttgctgtttgatccggaagacgaccgtgtcatcggc
tgcgccatcgttgggaccaatgcaggcgatctgattgccgaagctgccttggcgattgag
atgggggcagatgcggttgatcttgggcacactattcacccgcacccaaccctgtcagaa
accgtgaacttcgcggccgaaatgtttgaaggtacgatcacggacctgatgccgccgaag
aaaaagaagcactga

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