Rhodobacteraceae bacterium SC52: G5B39_13965
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Entry
G5B39_13965 CDS
T06457
Name
(GenBank) sarcosine oxidase subunit alpha
KO
K00302
sarcosine oxidase, subunit alpha [EC:
1.5.3.24
1.5.3.1
]
Organism
faq
Rhodobacteraceae bacterium SC52
Pathway
faq00260
Glycine, serine and threonine metabolism
faq01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
faq00001
]
09100 Metabolism
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
G5B39_13965
Enzymes [BR:
faq01000
]
1. Oxidoreductases
1.5 Acting on the CH-NH group of donors
1.5.3 With oxygen as acceptor
1.5.3.1 sarcosine oxidase (formaldehyde-forming)
G5B39_13965
1.5.3.24 sarcosine oxidase (5,10-methylenetetrahydrofolate-forming)
G5B39_13965
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GCV_T
SO_alpha_A3
Fer2_4
GCV_T_C
Pyr_redox_2
FAD_oxidored
NAD_binding_8
FAD_binding_2
DAO
Pyr_redox_3
Thi4
HI0933_like
FAD_binding_3
GIDA
AlaDh_PNT_C
Lycopene_cycl
Pyr_redox
Fer2_BFD
3HCDH_N
NAD_binding_7
XdhC_C
NAD_binding_9
Motif
Other DBs
NCBI-ProteinID:
QIE43142
LinkDB
All DBs
Position
pSC52_1:212245..215238
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AA seq
997 aa
AA seq
DB search
MTNFRVPGKGRVDQRRPVTFSFDDKEFTAAAGDTVASALLANGVHLMGRSFKYHRPRGPV
AAGSEEPNALIGTRRGKGQFEPNTRATVQEVYKGLAATSQNKFPNLKFDIGEINDKAYML
FSAGFYYKTFMWPRSFWDKVYEPFIRAAAGLGVSPTEEDPDHYASRYLHTDVLVVGAGPA
GLAAARSAAEAGLRVTLVDENSEAGGTLLSEPQALIEGAPAWDWLAAELAALTDLGVKIM
TRTTAIGYYHQNMVGLCEKLTDHVATPEANIPRERMWRVRAGQVILAQGALEKPLVFDGN
DRPGVMLAGSAQTYLNRYGVRVGDRAVVVTSHDSAYHTAFDLAESGTAIRAIVDTRAMPP
EDLVSQARIRSILVLTGHTVTGTSGRLRVKSVRVNPVRDGWVGEARELLCDCVLMSGGWT
PSLHLFSHTKGSLKWDAEQQTFLPDRMTEACQIAGAGRGLWGIEAALTDGAEMGAVAARE
LGKPKEAKRLTVEQDRTGTGESNTELPSDLSQGKARAFVDYQNDVTAKDLRLAVREGMRS
IEHVKRYTTNGMATDQGKMSNINGLNIASDALGKPQPQVGLTTFRPPYTPTSFGAFAGYH
RGDHFEATRKTPIDIWAEENGAAFEPVSQWRRAWYFPRAGETMDAAVQRECKATRESVGM
FDASTLGKIEVTGPDAVEFMNRMYTNPWTKLQPGRARYGLLLGDDGFIRDDGVIGRLTQD
RFHVTTTTGGAARVLNMMEDYLQTEWPDLKVWLTSTTEQWATIALNGPNARKVIEPFVEG
LDISAESFPHMSVAECTVAGFPARLFRISFTGELGFEINVPARHGLELWETLYAAGRPYD
LCTYGTETMHVLRAEKGYIIVGQDTDGTVTPFDAGIGWAVGKAKPDFVGMRALKRPDLVA
DGRKQLVGLLTEDSTTKLAEGAQIVLDPAQPVPMKMVGHVTSSYHSVAAGRPIAMALIAG
GHGRMGETVHIPMPDGVIRATVTSPVFYDPEGARLAI
NT seq
2994 nt
NT seq
+upstream
nt +downstream
nt
atgacgaactttcgtgtgccaggaaaaggccgagtagatcaaagacgacctgtaacgttc
agttttgacgataaagagttcacggcagcagcaggtgatacagtcgcgtccgctttgctt
gccaacggcgttcatttgatggggcgatccttcaagtaccatcgtccgcgcggtccagtt
gccgcgggttcagaagagcctaacgcattgatcgggacgcgtcgtggaaagggccagttc
gagccgaacacacgcgccacggttcaagaggtttacaaaggtctcgcagcgacgagccaa
aacaagtttccaaatttgaaatttgatatcggcgaaatcaatgacaaagcctatatgctt
ttttctgcggggttttactacaaaaccttcatgtggccgcgatctttttgggacaaggtc
tatgagccttttattcgtgctgccgcgggtttgggtgtatcgccaaccgaggaagaccca
gatcactacgcgtcgcgttatctgcacacagacgtgcttgttgtgggggcaggtcctgct
ggtctggcggcggcgcgcagcgctgcagaagctggcctgagggttacgcttgtagatgag
aattcggaggctggcgggacgcttctgagcgagccgcaggccctgatcgaaggcgcaccc
gcgtgggactggctggcggcggaactcgctgcactgacggacctgggcgtcaagatcatg
acgcggaccacggccatcgggtattaccatcagaacatggtcgggctgtgcgaaaaactg
accgaccacgtggcaacacctgaagcaaatatcccgcgggagcgcatgtggcgtgttcgt
gcgggtcaagtgattttggcgcaaggcgcgctggaaaagcccttggtctttgatggcaat
gacaggcccggggttatgctggccggatctgcgcagacctatttgaaccggtacggcgtg
cgtgtgggtgatcgtgcggttgtcgtgacaagccatgacagcgcatatcacacggcgttc
gatttggcggagagcggcacagcgatccgtgccattgtggatactcgggcgatgccaccc
gaagacttggtgtcgcaggccaggatcaggtccattttggttctgaccggccacacggtg
actggtacatctggacgactgcgcgtgaagtcggtgcgcgtgaacccggtgcgagacggt
tgggtcggcgaagcgcgggagttgctatgcgattgtgttttgatgtcaggtggatggacg
ccgtcgttacatcttttctcgcacacgaagggcagcttgaaatgggatgcggagcaacag
acgtttttgccggatcgcatgacggaagcgtgccagattgctggtgcagggcgtggcctt
tgggggattgaggccgctttgaccgacggtgcagaaatgggagctgtcgccgctcgggaa
cttggaaaaccaaaagaagccaagcgtttaaccgttgagcaggatcggaccggcaccgga
gagagcaacactgagttgcctagcgatttgagccagggcaaggctcgcgcctttgtggat
tatcaaaacgacgtgacagcgaaagatcttcgccttgcggtgcgcgagggcatgcgctcc
attgagcatgtgaaacgttacaccacgaatggcatggccactgatcagggtaaaatgagc
aatatcaatggattgaacattgcttctgatgcgcttggtaagccgcagccgcaggttggt
ctgacaacgtttcggccgccttatacgccaacaagttttggtgccttcgctggttatcac
cgaggagaccatttcgaagccactcggaagactccaattgacatttgggctgaagagaac
ggtgcggcctttgagccggtcagccaatggcgccgtgcgtggtatttcccgcgcgctggc
gaaacaatggacgccgccgtgcagcgcgaatgcaaagcaacgcgggaaagcgtgggcatg
ttcgatgcttccaccttgggcaagattgaggttacgggccccgatgcggtggaattcatg
aaccgcatgtatacgaacccgtggacgaagttgcagcccggacgcgcccgctacggtctt
ttgctgggcgatgatgggtttatccgggatgacggcgtcattgggcggctgactcaagac
cggtttcatgtcacgaccaccacgggcggagccgcgcgtgtgctcaatatgatggaggac
tatcttcagacggaatggcccgatttgaaggtctggctgacatccaccaccgaacaatgg
gcaacgattgcgttgaacgggccgaatgcgcgcaaagtgatcgagccgtttgttgaaggg
cttgatatttcagcagaatcctttccgcatatgtctgtggcggagtgtacagttgcgggc
tttcccgcccggcttttccggatcagctttacaggcgagttaggctttgagatcaacgtt
cccgcgcgtcatggtcttgagctttgggaaacgctttatgccgccggtcggccgtatgat
ctttgtacatacggcaccgaaaccatgcatgttttacgcgctgaaaagggttacatcatc
gttggccaagacacagatggcaccgtgacgccatttgatgcggggatcggctgggcagtt
ggtaaggccaaaccggatttcgtggggatgcgcgcactcaagcggccagatcttgtggca
gatgggcgcaaacagcttgtggggttgctgactgaggattccacgacgaagttggcagaa
ggagcgcagattgttctggatccggcccaacctgttcccatgaaaatggttggtcatgtt
acatcgtcgtaccacagcgttgcagccggaaggccaattgcgatggcattgatcgcaggc
gggcatggccggatgggcgagactgtgcacatcccgatgccggacggagtgatccgggcg
accgtcacgtcgccagtgttctatgatcccgaaggcgcgcgccttgccatttga
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