KEGG   Rhodobacteraceae bacterium SC52: G5B39_14655
Entry
G5B39_14655       CDS       T06457                                 
Name
(GenBank) HsdR family type I site-specific deoxyribonuclease
  KO
K01153  type I restriction enzyme, R subunit [EC:3.1.21.3]
Organism
faq  Rhodobacteraceae bacterium SC52
Brite
KEGG Orthology (KO) [BR:faq00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:faq02048]
    G5B39_14655
Enzymes [BR:faq01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.21  Endodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.21.3  type I site-specific deoxyribonuclease
     G5B39_14655
Prokaryotic defense system [BR:faq02048]
 Restriction and modification system (R-M system)
  Type I R-M system
   G5B39_14655
SSDB
Motif
Pfam: SWI2_SNF2 T1R_D3-like HSDR_N ResIII DEAD
Other DBs
NCBI-ProteinID: QIE43288
UniProt: A0A858CSJ6
LinkDB
Position
pSC52_2:complement(55..3123)
AA seq 1022 aa
MSKIGEAERKAQNRVIDLLSAHQTDTPGGLGWRYLGDWQQREGNANIEEDLLRPWLLSRG
YAPDIVTQAITLLKREARMEGTKLYEANQSFFEMLRYGVAVAPGPGEAPVTVRFIDWSAP
AANDTGVAEEVAIKGKDAKAWNKRPDLVLYVNGIALGVVELKKSTVGVGEGIRQTLDNQR
PEFIRHFFTTVQITFAGNDSEGLRYAPILTPQPYWLAWKEESEISARLDRDVTQMIAPAR
FLELIHDFTLFDGGIKKITRPNQYFAVKAAQERVRAQEGGIIWQTQGSGKSLIMVMLARW
IREAFPDGRILIVTDRKELDSQIEDVFGNTGDKVRRARSGNDLMAALADPTDRIICSLVH
KFGKREEGEMEGLISEIQTTNIGAPVGEFFVFIDEAHRTQSGKLASAMRKVLPEAMFVGF
TGTPLLKSDKGTSLEAFGPYIGTPYRFDEAVEDGVVLDLRYEARDIDQRIIAPGKIDAWF
EAKTKGLTPIAKATLKQRWGTLQRVLSSNDRLEQIANDVILDMEMKPRLHAGMGNAMLVA
GSIPEACKFLEIFRKSGSVLADKCAIVTSYKRAASEITGEETGMGETEKQFVHRVYTDLL
GDTSEEDYEEEALRLFKKEPGQMKLLIVVSRLLTGFDAPTATYIYIDKQMRDHGLFQAIC
RVNRLDGDDKDFGYIIDYKDLFRNIESAVGDYTSEAFDAFDKEDVEGLITDRAKQADDDL
RTARDVWLGLMDAVEQPKNDDEIYAYFSSPLGIENDPEAEEKARRRQALYKLAGRYARTY
ANVAAEADGSGLNELELSEMRKEVEHAIGVRDAVRLHSGDAVDMKLYEPAMRHLIDNYIR
ADDSQVISYLDDISLIDLVVSKGAQAEDDLPAPSKRKRENVAEAIENNVRKLIIDETPVN
PKFYDRMSDLLTDLVAQRRSGAIKYAEYLEKIAELVRAAKSGHGNTYPESMKTPGQRALF
DNLEQDEALALLVDEAVRATAPHGWRGHTMKEKKVRRCLEAEISDSDTVDTLLQILKNHS
EY
NT seq 3069 nt   +upstreamnt  +downstreamnt
atgagcaagatcggcgaggcggaacgcaaggcgcagaacagggtcattgacctgctgagc
gcacaccaaaccgacacgcccggtggcctcggctggcgataccttggtgactggcagcag
cgtgagggcaacgccaatatcgaggaggatctgctgcgcccctggctcctctcccgtggc
tacgcgcccgatatcgtcacccaagccatcaccctgctgaaacgcgaggcgcggatggag
ggcacgaagctctacgaggccaaccagagctttttcgagatgctccgctacggcgtggcc
gtcgcccctggcccaggagaggcccctgtcaccgtccgctttatcgactggtctgccccc
gccgccaatgacacgggcgtcgccgaagaggtcgctatcaagggcaaagacgccaaggct
tggaacaagcgacccgatctggtgctctatgtcaacggcatcgcattgggtgtggtagag
ttgaagaaatccaccgttggcgtcggcgaaggcatccgccagacgctcgacaaccagcgg
cccgagttcatccggcacttcttcaccacggtgcagatcacctttgccgggaacgacagc
gaggggctgcgctatgccccgatcctgacgccgcagccctattggctggcctggaaggaa
gagagcgagatctccgcccgcctcgaccgcgacgtgacgcagatgattgcgcccgcgcgg
ttcctggagctaatccacgatttcaccctgtttgacggtggcatcaagaagatcacgcgc
cccaaccagtatttcgccgtgaaggctgcgcaggaacgtgtgcgggcgcaggagggtggg
atcatctggcagacgcaagggtcgggcaagagcctgatcatggtgatgctggcccgctgg
atcagggaggcatttccggatggtcgtatcctgatcgtcacggatcgcaaggaactggac
agccagattgaagacgtatttggcaacacaggtgacaaagtgcgccgtgcgcgcagcggc
aacgacctgatggcggcgctggccgatccaaccgaccggatcatctgctcgctggtccac
aaattcggcaaacgcgaagagggcgagatggaggggctgatctctgagatccagaccact
aatatcggcgcacctgttggcgagttctttgtcttcatcgatgaagcccaccgcacccaa
tccggcaagctggccagcgcgatgcgcaaggtgttgccagaggcgatgttcgtcggcttt
accggcaccccattgctgaagtccgataagggcacatcgctggaagccttcggcccatac
atcggcacgccttaccgctttgatgaagcagtcgaggatggcgtggtattggacttgcgc
tatgaagcgcgggacattgaccagaggatcatcgcgccgggcaagatcgacgcatggttc
gaggcgaaaaccaaagggctgacacccatcgcaaaagcaacattgaagcagcgttggggt
acgctgcagcgcgtactgtcgagcaatgaccgattggaacagatcgccaacgatgtcatc
ctagatatggagatgaagccacgcctgcatgcgggcatgggaaacgccatgcttgtggct
ggatcaattcctgaggcgtgcaagttcttagagatctttcgcaagtccgggtcagtcttg
gccgacaaatgcgcgattgtgacctcctacaaacgggctgcatctgagattaccggcgaa
gaaactggcatgggtgaaacagaaaagcaatttgtccatcgcgtctatacggacctcctg
ggcgacacctcagaggaagactacgaagaggaagcgctgcggctgttcaagaaagaaccg
ggccagatgaagcttctgattgtcgtcagccgccttttgactgggtttgatgcgccgacg
gccacctacatctacattgacaagcagatgcgggatcacggccttttccaagcgatctgt
cgcgtgaaccgtctcgacggcgatgacaaggatttcggctatatcatcgattataaggat
ctgttccggaacatagagagcgccgtcggtgattatacctcggaagccttcgacgccttt
gacaaggaggatgttgagggtctgatcacggacagggccaagcaagcagatgatgatctg
cgcaccgcacgcgatgtctggctcgggcttatggatgccgtcgaacaaccaaagaatgat
gacgaaatctatgcctatttttcgagcccactgggcatcgagaatgatcccgaagcggaa
gaaaaagcccgtcggcgccaagcgctttacaagctggcagggcgatatgctcgcacatac
gcaaacgttgccgctgaagcagatgggtcgggcctcaacgaattggaactcagcgaaatg
cgcaaggaggttgaacacgccattggtgtgcgagatgccgtgcgccttcacagtggcgac
gcggtcgacatgaagctctacgagcctgccatgcgtcatctgattgacaattacattcgc
gccgatgactcgcaggtcatatcttaccttgatgacatcagcttgattgacctggtcgtg
agcaaaggggctcaagccgaagatgaccttccagcaccgtccaagcgcaagcgcgagaat
gtcgctgaggcgattgagaacaacgtccggaagctgatcatcgatgagacgcctgtgaac
ccgaagttctacgacaggatgtcggatctgttgacagaccttgtggctcagcgcaggagc
ggagcgattaagtatgccgagtatcttgaaaagattgcggagttggtaagagccgctaaa
tccgggcacggcaatacctatcccgagagtatgaagaccccggggcagagggcccttttt
gacaacttggaacaggacgaggcactcgcacttctagtagacgaagctgttcgggcaact
gcgccgcacggatggcgcgggcatacgatgaaagagaaaaaggtcaggcgttgcctagag
gcagagatttcggattccgacacagtcgatacccttctgcagatactgaagaaccatagt
gaatactga

DBGET integrated database retrieval system